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S12_scaffold_774_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_774_curated_1
bacterium YEK0313, Bacteria

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comp(1..327)
DNA (327bp) protein (109aa)
MFS transporter n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI00035FB86F
Putative niacin/nicotinamide transporter NaiP {ECO:0000313|EMBL:CEJ12205.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
major facilitator superfamily transporter
S12_scaffold_774_curated_2
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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702..1415
DNA (714bp) protein (238aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10) rbh
Orotate phosphoribosyltransferase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WXD1_9RHIZ rbh
S12_scaffold_774_curated_3
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1419..2057
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI0003704CD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI74560.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
S12_scaffold_774_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2070..2582)
DNA (513bp) protein (171aa)
Transcriptional regulator, MarR family n=1 Tax=Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48) RepID=E8RL41_ASTEC
Organic hydroperoxide resistance transcriptional regulator {ECO:0000313|EMBL:KFC74106.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
MarR family transcriptional regulator
S12_scaffold_774_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2628..3509
DNA (882bp) protein (294aa)
UPI0003CECEF6 related cluster n=1 Tax=unknown RepID=UPI0003CECEF6
Uncharacterized protein {ECO:0000313|EMBL:KFC74107.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
alpha/beta hydrolase fold protein
S12_scaffold_774_curated_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3511..4575)
DNA (1065bp) protein (355aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ferrochelatase (EC:4.99.1.1) rbh
Ferrochelatase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTL9_9RHIZ rbh
S12_scaffold_774_curated_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4759..6279
DNA (1521bp) protein (507aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031E1FD5 rbh
Nitronate monooxygenase {ECO:0000313|EMBL:KFC74109.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
5'-nucleotidase domain-containing protein rbh
S12_scaffold_774_curated_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6276..6974
DNA (699bp) protein (233aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Uracil-DNA glycosylase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IED9_METNO
uracil-DNA glycosylase
S12_scaffold_774_curated_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6984..8216)
DNA (1233bp) protein (411aa)
AMP-dependent synthetase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036A5A34 rbh
Coenzyme F390 synthetase {ECO:0000313|EMBL:KFC74111.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
AMP-dependent synthetase
S12_scaffold_774_curated_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8258..9103)
DNA (846bp) protein (282aa)
branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F488EC rbh
ABC transporter related protein {ECO:0000313|EMBL:KFC74113.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
livF1; branched-chain amino acid ABC transporter ATPase rbh
S12_scaffold_774_curated_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9174..10502)
DNA (1329bp) protein (443aa)
ABC transporter permease n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EAB938 rbh
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:KFC74114.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
branched-chain amino acid ABC transporter substrate-binding protein rbh
S12_scaffold_774_curated_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10605..11684)
DNA (1080bp) protein (360aa)
ABC transporter permease n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031C8B24 rbh
Amino acid/amide ABC transporter membrane protein 2, HAAT family {ECO:0000313|EMBL:KFC74115.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter permease rbh
S12_scaffold_774_curated_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11698..12771)
DNA (1074bp) protein (358aa)
ABC transporter permease n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031356E4 rbh
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:KFC74116.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
branched-chain amino acid ABC transporter permease rbh
S12_scaffold_774_curated_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12785..13600)
DNA (816bp) protein (272aa)
branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030767D8 rbh
Putative branched-chain amino acid ABC transport system ATP-binding protein {ECO:0000313|EMBL:KFC74117.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
branched-chain amino acid ABC transporter ATPase rbh
S12_scaffold_774_curated_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13597..15579)
DNA (1983bp) protein (661aa)
AMP-forming long-chain acyl-CoA synthetase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWS7_9RHIZ rbh
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:KFC74118.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
fadD3; AMP-dependent synthetase/ligase rbh
S12_scaffold_774_curated_16
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15853..16251
DNA (399bp) protein (133aa)
Lactoylglutathione lyase-like lyase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0C4P2_RHILT
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:EJC77837.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
glyoxalase/bleomycin resistance protein/dioxygenase
S12_scaffold_774_curated_17
unknown

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comp(16340..16525)
DNA (186bp) protein (62aa)

This feature has no annotations

S12_scaffold_774_curated_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16604..17278)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000319F9FE
Multiple sugar transport system ATP-binding protein {ECO:0000313|EMBL:KFC74120.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
transcriptional regulator
S12_scaffold_774_curated_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17371..20928)
DNA (3558bp) protein (1186aa)
Indolepyruvate ferredoxin oxidreductase, alpha/beta subunit n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTL4_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC74124.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
indolepyruvate ferredoxin oxidoreductase rbh
S12_scaffold_774_curated_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21244..21888
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000308D35D
Uncharacterized protein {ECO:0000313|EMBL:KFC74125.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter substrate-binding protein
S12_scaffold_774_curated_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21879..22901
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000367E0C4 rbh
High-affinity nickel-transporter {ECO:0000313|EMBL:KFC74126.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
high-affinity nickel-transporter rbh
S12_scaffold_774_curated_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22905..23201)
DNA (297bp) protein (99aa)
UPI0003CE8425 related cluster n=1 Tax=unknown RepID=UPI0003CE8425
Nitrile hydratase accessory protein {ECO:0000313|EMBL:KFC74128.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
Displaying 22 items

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