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S12_scaffold_608_curated

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_608_curated_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..760
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI0003667D3E
Putative methyl-accepting chemotaxis protein (MCP) {ECO:0000313|EMBL:KFC74069.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S12_scaffold_608_curated_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(804..1319)
DNA (516bp) protein (172aa)
Putative redox protein, regulator of disulfide bond formation n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUC2_9RHIZ
OsmC family protein {ECO:0000313|EMBL:KFC75575.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
OsmC family protein
S12_scaffold_608_curated_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1417..2199)
DNA (783bp) protein (261aa)
ABC transporter ATP-binding protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI00036B32BA rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFC75576.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter-like protein rbh
S12_scaffold_608_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2212..3042)
DNA (831bp) protein (277aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUC4_9RHIZ rbh
ABC transporter permease protein {ECO:0000313|EMBL:KFC75577.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
binding-protein-dependent transport system inner membrane protein rbh
S12_scaffold_608_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3061..4023)
DNA (963bp) protein (321aa)
ABC transporter, substrate-binding protein, aliphatic sulfonates family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUC5_9RHIZ rbh
Aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein {ECO:0000313|EMBL:KFC75578.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
aliphatic sulfonate ABC transporter substrate-binding protein rbh
S12_scaffold_608_curated_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4290..7100
DNA (2811bp) protein (937aa)
PII uridylyl-transferase (EC:2.7.7.59) rbh
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUC6_9RHIZ rbh
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
S12_scaffold_608_curated_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7250..7849
DNA (600bp) protein (200aa)
Protein GrpE n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZJ19_METPB
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
GrpE protein HSP-70 cofactor
S12_scaffold_608_curated_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7854..8474
DNA (621bp) protein (207aa)
UPI0003CE9FA2 related cluster n=1 Tax=unknown RepID=UPI0003CE9FA2
Uncharacterized protein {ECO:0000313|EMBL:KFC75581.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S12_scaffold_608_curated_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8471..9094)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031483C4 rbh
Alkylated DNA repair protein alkB {ECO:0000313|EMBL:KFC75582.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
alkylated DNA repair protein
S12_scaffold_608_curated_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9097..9903)
DNA (807bp) protein (269aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
dihydrodipicolinate reductase (EC:1.3.1.26) rbh
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4IGI3_RHIML rbh
S12_scaffold_608_curated_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9997..10986)
DNA (990bp) protein (330aa)
Import inner membrane translocase subunit Tim44 n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LVB7_METRJ rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC75584.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
import inner membrane translocase subunit Tim44 rbh
S12_scaffold_608_curated_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11181..11480
DNA (300bp) protein (100aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC75585.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
S12_scaffold_608_curated_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12066..13211
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000362FDDE
Extensin-like {ECO:0000313|EMBL:KFC75587.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
extensin family protein
S12_scaffold_608_curated_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13320..14258)
DNA (939bp) protein (313aa)
Peptidase U6 penicillin-insensitive murein endopeptidase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UCG4_METS4 rbh
Peptidase U6 penicillin-insensitive murein endopeptidase {ECO:0000313|EMBL:KFC75588.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
mepA; penicillin-insensitive murein endopeptidase rbh
S12_scaffold_608_curated_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14375..15325
DNA (951bp) protein (317aa)
ABC transporter substrate-binding protein n=1 Tax=Acidovorax avenae RepID=UPI0002EC38DB rbh
3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/3-hydroxybutyryl-CoA epimerase {ECO:0000313|EMBL:KFC75589.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein rbh
S12_scaffold_608_curated_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15446..15616
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000369744D
Uncharacterized protein {ECO:0000313|EMBL:KFC75590.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S12_scaffold_608_curated_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15641..16594)
DNA (954bp) protein (318aa)
Ornithine cyclodeaminase {ECO:0000313|EMBL:KFC75591.1}; EC=4.3.1.12 {ECO:0000313|EMBL:KFC75591.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ornithine cyclodeaminase/mu-crystallin (EC:4.3.1.12) rbh
Putative ornithine cyclodeaminase, mu-crystallin n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYM2_9RHIZ rbh
S12_scaffold_608_curated_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16594..16932)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003605012
Phosphate transport system protein {ECO:0000313|EMBL:KFC75592.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
GMP synthase, Glutamine amidotransferase domain protein
S12_scaffold_608_curated_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16970..17254)
DNA (285bp) protein (95aa)
Integration host factor subunit beta n=3 Tax=Labrenzia RepID=A0P3Q5_9RHOB
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
integration host factor subunit beta
S12_scaffold_608_curated_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17283..18254)
DNA (972bp) protein (324aa)
Putative peptidase S49 family signal peptide peptidase SppA {ECO:0000313|EMBL:KFC75594.1}; EC=3.4.21.- {ECO:0000313|EMBL:KFC75594.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FD250E rbh
signal peptide peptidase SppA, 36K type rbh
S12_scaffold_608_curated_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18416..19705)
DNA (1290bp) protein (430aa)
HSP70 family molecular chaperone n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IKW3_BEII9 rbh
Molecular chaperone {ECO:0000313|EMBL:KFC75595.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
HSP70 family molecular chaperone rbh
S12_scaffold_608_curated_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(19863..21566)
DNA (1704bp) protein (568aa)
30S ribosomal protein S1 n=1 Tax=Methylobacterium sp. 88A RepID=UPI00035CC62F rbh
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
rpsA; 30S ribosomal protein S1 rbh
S12_scaffold_608_curated_23
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21881..22414)
DNA (534bp) protein (178aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BQ20_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05829.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
S12_scaffold_608_curated_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22602..23159
DNA (558bp) protein (186aa)
membrane protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E2B6B0
LemA family protein {ECO:0000313|EMBL:KFC75599.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S12_scaffold_608_curated_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23197..24270
DNA (1074bp) protein (358aa)
Protease HtpX-like protein {ECO:0000313|EMBL:KFC75600.1}; EC=3.4.24.- {ECO:0000313|EMBL:KFC75600.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031CAED3 rbh
peptidase M48, Ste24p rbh
S12_scaffold_608_curated_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(24274..25179)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000305BDA4
Tax=GWA2_Rokubacteria_73_35_curated
S12_scaffold_608_curated_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25184..25792)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003193EF1
2-hydroxychromene-2-carboxylate isomerase {ECO:0000313|EMBL:KFC75601.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
DSBA oxidoreductase
S12_scaffold_608_curated_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26040..27272
DNA (1233bp) protein (411aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Argininosuccinate synthase n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1Z892_METPB rbh
argininosuccinate synthase rbh
S12_scaffold_608_curated_29
unknown

Not on your lists

comp(27396..28625)
DNA (1230bp) protein (410aa)

This feature has no annotations

S12_scaffold_608_curated_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28804..29157
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00037078AE
Uncharacterized protein {ECO:0000313|EMBL:KFC75004.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
Displaying items 1-30 of 45 in total

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