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S12_scaffold_524_curated

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_524_curated_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..728
DNA (726bp) protein (242aa)
peptide chain release factor 3 n=1 Tax=Methylobacterium sp. 77 RepID=UPI000378411A
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
peptide chain release factor 3
S12_scaffold_524_curated_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(852..1328)
DNA (477bp) protein (159aa)
ArsR family transcriptional regulator n=1 Tax=Roseomonas sp. B5 RepID=UPI00031D1DA9
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:KFC75514.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
transcriptional regulator, AsnC family
S12_scaffold_524_curated_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1506..2027
DNA (522bp) protein (174aa)
Cysteine dioxygenase type I n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LXU7_METRJ
Cysteine dioxygenase type I {ECO:0000313|EMBL:KFC75513.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cysteine dioxygenase type I
S12_scaffold_524_curated_4
bacterium YEK0313, Bacteria

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2105..2695
DNA (591bp) protein (197aa)
pyocin R, lytic enzyme n=1 Tax=Kaistia granuli RepID=UPI00037291AA
Chitinase class I {ECO:0000313|EMBL:CEJ15922.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
peptidoglycan binding domain-containing protein
S12_scaffold_524_curated_5
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2854..3363
DNA (510bp) protein (170aa)
Tryptophan-rich sensory protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVL2_9RHIZ
Tryptophan-rich sensory protein {ECO:0000313|EMBL:EIM28004.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
tryptophan-rich sensory protein
S12_scaffold_524_curated_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3360..3734)
DNA (375bp) protein (125aa)
MFS transporter n=1 Tax=Methylobacterium sp. 88A RepID=UPI00037D66A8
Response regulator receiver {ECO:0000313|EMBL:KFC73149.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
response regulator receiver protein
S12_scaffold_524_curated_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3744..4301)
DNA (558bp) protein (186aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:KFC73148.1}; EC=2.4.2.8 {ECO:0000313|EMBL:KFC73148.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hpt; Hypoxanthine-guanine phosphoribosyltransferase (EC:2.4.2.8)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030E1387
S12_scaffold_524_curated_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4436..5236)
DNA (801bp) protein (267aa)
MJ0042 family finger-like protein n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9W6P6_METEP
Putative Zinc finger/thioredoxin {ECO:0000313|EMBL:KFC73147.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Zinc finger-domain-containing protein
S12_scaffold_524_curated_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5434..6093
DNA (660bp) protein (220aa)
cell division protein FtsE n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F3BD06 rbh
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:KFC73146.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cell division ATP-binding protein FtsE rbh
S12_scaffold_524_curated_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6080..7042
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000316ABF0 rbh
Cell division protein {ECO:0000313|EMBL:KFC73145.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein rbh
S12_scaffold_524_curated_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7149..7955
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y194_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC73144.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S12_scaffold_524_curated_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8012..8773
DNA (762bp) protein (254aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z036_9RHIZ rbh
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:KFC73143.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
phospholipid/glycerol acyltransferase
S12_scaffold_524_curated_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8880..9278
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z035_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC73142.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
S12_scaffold_524_curated_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9306..9875)
DNA (570bp) protein (190aa)
ChaC family protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UQG7_METS4
ChaC family protein {ECO:0000313|EMBL:KFC73141.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ChaC family protein
S12_scaffold_524_curated_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10100..11140
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IBR0_METNO
Uncharacterized protein {ECO:0000313|EMBL:KFC73140.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S12_scaffold_524_curated_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11193..12089)
DNA (897bp) protein (299aa)
RNA polymerase sigma factor RpoH n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IPM7_METNO rbh
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
RNA polymerase factor sigma-32 rbh
S12_scaffold_524_curated_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12308..13336)
DNA (1029bp) protein (343aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Pseudouridine synthase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUE3_9RHIZ rbh
pseudouridine synthase rbh
S12_scaffold_524_curated_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13383..15083)
DNA (1701bp) protein (567aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EA925A rbh
HemY-like protein {ECO:0000313|EMBL:KFC73137.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
HemY domain-containing protein rbh
S12_scaffold_524_curated_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15102..16955)
DNA (1854bp) protein (618aa)
Uroporphyrinogen III synthase HEM4 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IBT2_METNO
Uroporphyrinogen III synthase HEM4 {ECO:0000313|EMBL:KFC73136.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
uroporphyrinogen III synthase HEM4
S12_scaffold_524_curated_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17044..18282
DNA (1239bp) protein (413aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57) rbh
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMT4_9RHIZ rbh
S12_scaffold_524_curated_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18279..19274
DNA (996bp) protein (332aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
glycerol-3-phosphate dehydrogenase n=1 Tax=Methylobacterium sp. 88A RepID=UPI000367D7DA rbh
S12_scaffold_524_curated_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19286..19612
DNA (327bp) protein (109aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC73132.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
S12_scaffold_524_curated_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19612..20019
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IEB4_XANP2
Uncharacterized protein {ECO:0000313|EMBL:KFC73131.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S12_scaffold_524_curated_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20268..22220
DNA (1953bp) protein (651aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
acetyl-CoA synthetase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031345E1 rbh
acetyl-CoA synthetase rbh
S12_scaffold_524_curated_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22439..23158
DNA (720bp) protein (240aa)
membrane protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000346AD55
Protease inhibitor Inh {ECO:0000313|EMBL:KFC63687.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
outer membrane lipoprotein omp19
S12_scaffold_524_curated_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23303..23917)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000311B007
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:KFC63686.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
GCN5 family acetyltransferase
S12_scaffold_524_curated_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24245..24916
DNA (672bp) protein (224aa)
Putative cold shock protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AJQ0_AZOBR
Cold-shock DNA-binding protein family protein {ECO:0000313|EMBL:KFC63707.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cold-shock protein
S12_scaffold_524_curated_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25029..25523)
DNA (495bp) protein (165aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Bacterioferritin n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H999_9BRAD
bfr; bacterioferritin
S12_scaffold_524_curated_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25642..25929)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U7D1_METS4
Putative bacterioferritin-associated {ECO:0000313|EMBL:KFC63702.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S12_scaffold_524_curated_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25926..26459)
DNA (534bp) protein (178aa)
Ferric uptake regulator family protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LM75_9RHIZ
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:KFC63701.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ferric uptake regulator family protein
Displaying items 1-30 of 38 in total

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