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S12_scaffold_887_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_887_curated_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..643)
DNA (642bp) protein (214aa)
Succinylglutamate desuccinylase/aspartoacylase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MN31_9RHIZ rbh
Putative Succinylglutamate desuccinylase/aspartoacylase {ECO:0000313|EMBL:KFC65362.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
succinylglutamatedesuccinylase/aspartoacylase rbh
S12_scaffold_887_curated_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

722..1480
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036EA793
Transcriptional regulator, GntR family {ECO:0000313|EMBL:KFC65361.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
GntR family transcriptional regulator
S12_scaffold_887_curated_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1477..2670
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000370B563 rbh
Enolase superfamily enzyme {ECO:0000313|EMBL:KFC65360.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
mandelate racemase/muconate lactonizing protein rbh
S12_scaffold_887_curated_4
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2678..4045)
DNA (1368bp) protein (456aa)
C4-dicarboxylate transport transcriptional regulatory protein DctD n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVD9_9PROT rbh
C4-dicarboxylate transport transcriptional regulatory protein DctD {ECO:0000313|EMBL:EHM03012.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
Fis family two component sigma-54 specific transcriptional regulator rbh
S12_scaffold_887_curated_5
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4042..5925)
DNA (1884bp) protein (628aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
dctB; C4-dicarboxylate transport sensor protein (EC:2.7.3.-) rbh
Signal transduction histidine kinase regulating C4-dicarboxylate transport system n=1 Tax=Rhizobium sp. CF142 RepID=J2ANV3_9RHIZ rbh
S12_scaffold_887_curated_6
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6070..7404
DNA (1335bp) protein (445aa)
C4-dicarboxylate transport protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVE1_9PROT rbh
C4-dicarboxylate transport protein {ECO:0000256|HAMAP-Rule:MF_01300}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
C4-dicarboxylate transporter rbh
S12_scaffold_887_curated_7
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7480..8679)
DNA (1200bp) protein (400aa)
Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I3M4_9BRAD rbh
Dehydratase {ECO:0000313|EMBL:KJB96731.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hypothetical protein rbh
S12_scaffold_887_curated_8
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8752..9516)
DNA (765bp) protein (255aa)
PREDICTED: 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C14A9B rbh
Gluconate 5-dehydrogenase {ECO:0000313|EMBL:EMS99799.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
gluconate dehydrogenase rbh
S12_scaffold_887_curated_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9527..10276)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000360B3B4
GntR family transcriptional regulator
GntR domain protein {ECO:0000313|EMBL:ADU99847.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
S12_scaffold_887_curated_10
unknown

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10359..10640
DNA (282bp) protein (94aa)

This feature has no annotations

S12_scaffold_887_curated_trna_1
unknown

Not on your lists

11050..11122
DNA (73bp)
transferRNA Phe
S12_scaffold_887_curated_11
unknown

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comp(11225..11470)
DNA (246bp) protein (82aa)

This feature has no annotations

S12_scaffold_887_curated_12
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11540..12127
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5MI80_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CEL28661.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
hypothetical protein
S12_scaffold_887_curated_13
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12466..13746)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P8H0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS35940.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
S12_scaffold_887_curated_14
bacterium YEK0313, Bacteria

Not on your lists

comp(13830..14057)
DNA (228bp) protein (76aa)
DNA gyrase inhibitor YacG n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VDW8_RHOPX
DNA gyrase inhibitor YacG {ECO:0000256|SAAS:SAAS00085446}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
S12_scaffold_887_curated_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14029..14850)
DNA (822bp) protein (274aa)
Putative short-chain dehydrogenase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GFZ0_9BRAD rbh
Feruloyl-CoA synthase {ECO:0000313|EMBL:KFC63847.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative short-chain dehydrogenase rbh
S12_scaffold_887_curated_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14948..15556)
DNA (609bp) protein (203aa)
Maf-like protein RPD_4276 n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Y4276_RHOPS rbh
Maf-like protein FG93_05357 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Maf-like protein rbh
S12_scaffold_887_curated_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15860..16243
DNA (384bp) protein (128aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC63849.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
S12_scaffold_887_curated_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16264..17100)
DNA (837bp) protein (279aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:KFC63850.1}; EC=2.7.8.8 {ECO:0000313|EMBL:KFC63850.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8) rbh
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F39580 rbh
S12_scaffold_887_curated_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17333..18034)
DNA (702bp) protein (234aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00093350};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z2J8_9RHIZ rbh
S12_scaffold_887_curated_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18197..18688)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000362AA83
Uncharacterized protein {ECO:0000313|EMBL:KFC63853.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
S12_scaffold_887_curated_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18880..19488)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003046D2B
ABC transporter related protein {ECO:0000313|EMBL:KFC63854.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter-like protein
Displaying 22 items

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