name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
S12_scaffold_192_curated_1
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(297..1163)
|
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DJX2_BRAJP
LysR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:BAL11182.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
|
|
S12_scaffold_192_curated_2
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1368..3209
|
Dihydroxy-acid dehydratase {ECO:0000255|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000255|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000255|HAMAP-Rule:MF_00012};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
rbh
dihydroxy-acid dehydratase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036A7E64
rbh
|
|
S12_scaffold_192_curated_3
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3401..4507
|
UPI0003CE1FFE related cluster n=1 Tax=unknown RepID=UPI0003CE1FFE
rbh
Membrane protein {ECO:0000313|EMBL:ESY66592.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
HPP family protein
rbh
|
|
S12_scaffold_192_curated_4
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4577..5512
|
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000308CD50
Bradyrhizobium elkanii strain UASWS1015 Contig175, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49004.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
|
|
S12_scaffold_192_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5572..6054)
|
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EB04_BRASB
Uncharacterized protein {ECO:0000313|EMBL:KFC61574.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
|
|
S12_scaffold_192_curated_6
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6290..6733
|
Transcriptional regulator, AsnC family n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EBE8_BRASB
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ABQ33492.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
|
|
S12_scaffold_192_curated_7
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6915..8042
|
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EBF0_BRASB
rbh
Saccharopine dehydrogenase {ECO:0000313|EMBL:KJC51281.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
rbh
|
|
S12_scaffold_192_curated_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8076..8690)
|
Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTY0_9RHIZ
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:KFC72938.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
haloacid dehalogenase
|
|
S12_scaffold_192_curated_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8789..9697
|
Ferric reductase domain-containing protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9X0S7_9RHIZ
Flavocytochrome YedZ {ECO:0000313|EMBL:KFC72939.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Ferric reductase domain-containing protein
|
|
S12_scaffold_192_curated_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9777..11507
|
Arabinose efflux permease family protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YS10_9RHIZ
rbh
MFS permease {ECO:0000313|EMBL:KFC72940.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative MFS permease
rbh
|
|
S12_scaffold_192_curated_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11518..12315)
|
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Undecaprenyl-diphosphatase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTX0_9RHIZ
rbh
putative undecaprenol kinase
rbh
|
|
S12_scaffold_192_curated_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12573..13265
|
Glutathione S-transferase domain n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UFD3_METS4
rbh
Glutathione S-transferase domain protein {ECO:0000313|EMBL:KFC66943.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glutathione S-transferase domain-containing protein
rbh
|
|
S12_scaffold_192_curated_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13325..14401
|
Epoxyqueuosine reductase {ECO:0000313|EMBL:KFC66944.1}; EC=1.1.-.- {ECO:0000313|EMBL:KFC66944.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000314D89B
rbh
hypothetical protein
rbh
|
|
S12_scaffold_192_curated_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14398..15264
|
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4TIZ4_9RHIZ
rbh
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:KFC66945.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
NAD-dependent epimerase/dehydratase
rbh
|
|
S12_scaffold_192_curated_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15265..16116)
|
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI00035FAA48
rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC66946.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
rbh
|
|
S12_scaffold_192_curated_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16318..18411)
|
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:KFC66947.1}; EC=2.7.3.- {ECO:0000313|EMBL:KFC66947.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D385A0
rbh
PAS/PAC sensor hybrid histidine kinase
rbh
|
|
S12_scaffold_192_curated_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18505..20043)
|
ATPase AAA n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030839E3
rbh
Mg chelatase-related protein {ECO:0000313|EMBL:KFC66948.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
chlI; Mg chelatase, subunit ChlI
|
|
S12_scaffold_192_curated_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20340..20642)
|
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F22340
Uncharacterized protein {ECO:0000313|EMBL:KFC66951.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
|
|
S12_scaffold_192_curated_trna_1
unknown
|
Not on your lists |
20841..20927
|
transferRNA Ser
|
|
S12_scaffold_192_curated_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21103..22332
|
Phage integrase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLT5_NITHX
rbh
integrase
Phage integrase {ECO:0000313|EMBL:ABE62812.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
|
|
S12_scaffold_192_curated_20
Erwinia mallotivora, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22327..22512)
|
Uncharacterized protein n=2 Tax=Salmonella enterica I RepID=V1XAF3_SALET
Transcriptional regulator {ECO:0000313|EMBL:EXU75351.1}; TaxID=69222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia mallotivora.;"
DNA binding protein
|
|
S12_scaffold_192_curated_21
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22524..22916)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037D0D46
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
|
|
S12_scaffold_192_curated_22
unknown
|
Not on your lists |
comp(22913..23128)
|
This feature has no annotations |
|
S12_scaffold_192_curated_23
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23125..23607)
|
Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens DSM 13060 RepID=H1KCB2_METEX
Putative uncharacterized protein {ECO:0000313|EMBL:EHP94929.1}; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
|
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S12_scaffold_192_curated_24
unknown
|
Not on your lists |
comp(23604..23753)
|
This feature has no annotations |
|
S12_scaffold_192_curated_25
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23750..24217)
|
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003757922
tRNA/rRNA methyltransferase {ECO:0000313|EMBL:EEE06885.1}; TaxID=513052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CGD2.;"
tRNA/rRNA methyltransferase SpoU
|
|
S12_scaffold_192_curated_26
unknown
|
Not on your lists |
comp(24221..24346)
|
This feature has no annotations |
|
S12_scaffold_192_curated_27
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24343..24744)
|
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YP11_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM25703.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
HNH nuclease
|
|
S12_scaffold_192_curated_28 |
Not on your lists |
comp(24744..25193)
|
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CJN7_VARPS
Uncharacterized protein {ECO:0000313|EMBL:KKM19360.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
|
|
S12_scaffold_192_curated_29
Synechococcus sp. RS9917, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria
|
Not on your lists |
comp(25190..25903)
|
hypothetical protein n=1 Tax=Synechococcus sp. CB0101 RepID=UPI00020012CD
Uncharacterized protein {ECO:0000313|EMBL:EAQ67954.1}; TaxID=221360 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. RS9917.;"
hypothetical protein
|