name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
S12_scaffold_185_curated_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2..481
|
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FA3DCA
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
|
|
S12_scaffold_185_curated_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
687..2279
|
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
rbh
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000365DE88
rbh
|
|
S12_scaffold_185_curated_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2483..3595
|
ATP phosphoribosyltransferase involved in histidine biosynthesis n=1 Tax=Microvirga sp. WSM3557 RepID=I4YV14_9RHIZ
rbh
Suspect SCG annotation. See neighboring gene [S12_scaffold_185_curated_2].
ATP phosphoribosyltransferase regulatory subunit HisZ {ECO:0000313|EMBL:KFC73345.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hisZ; ATP phosphoribosyltransferase regulatory subunit
rbh
|
|
S12_scaffold_185_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3592..4578
|
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ATP phosphoribosyltransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YV13_9RHIZ
rbh
hisG; ATP phosphoribosyltransferase
rbh
|
|
S12_scaffold_185_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4695..5201
|
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037A7706
META domain protein {ECO:0000313|EMBL:KFC73343.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
|
|
S12_scaffold_185_curated_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5313..7406)
|
ABC transporter related n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ER24_METSB
rbh
Putative ABC transporter, ATP-binding protein, permease {ECO:0000313|EMBL:KFC73342.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter-like protein
rbh
|
|
S12_scaffold_185_curated_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7631..8743)
|
amino acid ABC transporter substrate-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037A4F77
rbh
High-affinity leucine-specific transport system, periplasmic binding protein {ECO:0000313|EMBL:KFC74035.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
extracellular ligand-binding receptor
rbh
|
|
S12_scaffold_185_curated_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8919..9833)
|
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003643305
rbh
Putative PhnD protein, phosphonate ABC transporter, exported protein {ECO:0000313|EMBL:KFC73340.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter, phosphonate, periplasmic substrate-binding protein phnD
|
|
S12_scaffold_185_curated_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9975..11612)
|
molecular chaperone GroEL n=1 Tax=Methylocystis parvus RepID=UPI0002F905FB
rbh
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
chaperonin GroEL
rbh
|
|
S12_scaffold_185_curated_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11661..11948)
|
molecular chaperone GroES n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030153DE
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
groES; co-chaperonin GroES
|
|
S12_scaffold_185_curated_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12177..12632
|
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00036E60A1
Transcriptional regulator, MarR family {ECO:0000313|EMBL:KFC64183.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
MarR family transcriptional regulator
|
|
S12_scaffold_185_curated_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12705..13175
|
Phenylacetic acid degradation-related protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NYS6_GRAMM
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:KFC64182.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
phenylacetic acid degradation-related protein
|
|
S12_scaffold_185_curated_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13172..14014)
|
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031C41F0
Uncharacterized protein {ECO:0000313|EMBL:KFC64178.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
|
|
S12_scaffold_185_curated_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14011..14502)
|
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036BA887
Transcriptional regulatory protein {ECO:0000313|EMBL:KFC64177.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
N-acetyltransferase GCN5
|
|
S12_scaffold_185_curated_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14719..16149
|
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CA80_METED
rbh
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:KFC64175.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
rbh
|
|
S12_scaffold_185_curated_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16319..17137
|
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI0003720AEE
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:KFC64174.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ErfK/YbiS/YcfS/YnhG family protein
|
|
S12_scaffold_185_curated_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17236..18033)
|
Putative periplasmic ligand-binding sensor protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LYH1_METRJ
Putative periplasmic ligand-binding sensor protein {ECO:0000313|EMBL:KFC64172.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative periplasmic ligand-binding sensor protein
|
|
S12_scaffold_185_curated_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18188..18949)
|
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YKH0_9RHIZ
rbh
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:KFC64170.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
|
|
S12_scaffold_185_curated_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19132..20538)
|
UPI0003CF3463 related cluster n=1 Tax=unknown RepID=UPI0003CF3463
rbh
MATE efflux family protein {ECO:0000313|EMBL:KFC64169.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
MATE efflux family protein
rbh
|
|
S12_scaffold_185_curated_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20684..21913
|
N-carbamoyl-L-amino acid hydrolase {ECO:0000313|EMBL:KFC64167.1}; EC=3.5.1.87 {ECO:0000313|EMBL:KFC64167.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Beta-ureidopropionase n=1 Tax=Rhodovulum sp. PH10 RepID=J6J2F0_9RHOB
rbh
hydantoinase/carbamoylase family amidase
rbh
|
|
S12_scaffold_185_curated_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21925..23337
|
Amidotransferase (Amidase) {ECO:0000313|EMBL:KFC64166.1}; EC=3.5.1.4 {ECO:0000313|EMBL:KFC64166.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
amidase (EC:3.5.1.4)
rbh
Amidase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8I9K9_METNO
rbh
|
|
S12_scaffold_185_curated_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23551..25146
|
Putative ABC transporter periplasmic-binding protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ELS5_BRASB
rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFC64165.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter substrate-binding protein
rbh
|
|
S12_scaffold_185_curated_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25279..26220
|
ABC transporter, permease protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RQM3_9PROT
rbh
Putative ABC transporter permease protein {ECO:0000313|EMBL:KFC64164.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative ABC transporter permease protein
rbh
|
|
S12_scaffold_185_curated_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26217..27113
|
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y2Z3_9RHIZ
rbh
Putative ABC transporter permease protein oligopeptide/dipeptide ABC transporter {ECO:0000313|EMBL:KFC64163.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
binding-protein-dependent transport system inner membrane protein
rbh
|
|
S12_scaffold_185_curated_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27227..28162
|
N-carbamyl-D-amino acid amidohydrolase n=1 Tax=Thauera sp. 28 RepID=N6YKU2_9RHOO
rbh
N-carbamyl-D-amino acid amidohydrolase {ECO:0000313|EMBL:KFC64162.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
N-carbamyl-D-amino acid amidohydrolase
rbh
|
|
S12_scaffold_185_curated_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28184..29347
|
Amidohydrolase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I3F1_AZOC5
rbh
Putative amidohydrolase {ECO:0000313|EMBL:KFC64161.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
dihydroorotase
rbh
|
|
S12_scaffold_185_curated_27
bacterium YEK0313, Bacteria
|
Not on your lists |
29354..29863
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJ62_9BRAD
Acetyltransferase (GNAT) family protein {ECO:0000313|EMBL:CEJ11300.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
acetyltransferase
|
|
S12_scaffold_185_curated_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29911..30369
|
Endoribonuclease L-PSP n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U9J5_METS4
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:KFC64160.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
endoribonuclease L-PSP
|
|
S12_scaffold_185_curated_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30366..31487
|
Putative amino acid processing enzyme-related protein (Aldolase or racemase) n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TJJ7_9BRAD
rbh
Putative amino acid processing enzyme-related protein (Aldolase or racemase) {ECO:0000313|EMBL:KFC64159.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
amino acid processing enzyme-like protein
rbh
|
|
S12_scaffold_185_curated_30
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31489..32079)
|
type VI secretion protein Vgr n=1 Tax=Variovorax paradoxus RepID=UPI00037CD835
putative type VI secretion system protein, Vgr family
Putative type VI secretion system protein, Vgr family {ECO:0000313|EMBL:AGU47743.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|