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S12_scaffold_219_curated

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_219_curated_1
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

1..1047
DNA (1047bp) protein (349aa)
Ribosomal protein S12 methylthiotransferase RimO id=1855862 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
radical SAM protein rbh
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_219_curated_2
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1133..1603
DNA (471bp) protein (157aa)
phosphohistidine phosphatase n=1 Tax=Desulfitobacterium hafniense RepID=UPI000371102D
phosphohistidine phosphatase SixA
Phosphohistidine phosphatase, SixA {ECO:0000313|EMBL:ACL20144.1}; TaxID=272564 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain DCB-2 / DSM 10664).;"
S12_scaffold_219_curated_3
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1608..2405
DNA (798bp) protein (266aa)
CHAD domain containing protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LG40_ACEWD
CHAD domain-containing protein
CHAD domain containing protein {ECO:0000313|EMBL:AFA49516.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
S12_scaffold_219_curated_4
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2421..3326
DNA (906bp) protein (302aa)
Ppx/GppA phosphatase family protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EID8_9CLOT
Ppx/GppA phosphatase family protein {ECO:0000313|EMBL:EEG28734.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
Ppx/GppA phosphatase
S12_scaffold_219_curated_5
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3328..5463
DNA (2136bp) protein (712aa)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
polyphosphate kinase (EC:2.7.4.1) rbh
Polyphosphate kinase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EID9_9CLOT rbh
S12_scaffold_219_curated_6
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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comp(5453..6790)
DNA (1338bp) protein (446aa)
Putative adenylate-forming enzyme id=2050520 bin=GWE2_Firmicute_51_13 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
hypothetical protein
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_219_curated_7
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(6787..8013)
DNA (1227bp) protein (409aa)
id=2050519 bin=GWE2_Firmicute_51_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_219_curated_8
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8211..8504
DNA (294bp) protein (98aa)
Putative zinc-binding protein n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0JR74_9FIRM
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
S12_scaffold_219_curated_9
[Bacillus] selenitireducens, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8559..9497)
DNA (939bp) protein (313aa)
Alpha/beta hydrolase fold protein n=1 Tax=Bacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10) RepID=D6XWJ8_BACIE
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADH97840.1}; TaxID=439292 species="Bacteria; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae; unclassified Sporolactobacillaceae.;" source="Bacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10).;"
S12_scaffold_219_curated_10
Jeotgalibacillus sp. D5, Jeotgalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9578..10003)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Sporolactobacillus laevolacticus DSM 442 RepID=V6IXW6_9BACL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD89341.1}; TaxID=1508404 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Jeotgalibacillus.;" source="Jeotgalibacillus sp. D5.;"
S12_scaffold_219_curated_11
Petrotoga mobilis, Petrotoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

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10137..12113
DNA (1977bp) protein (659aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BJ45_PETMO rbh
peptidase S9 prolyl oligopeptidase rbh
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:ABX30990.1}; TaxID=403833 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Petrotoga.;" source="Petrotoga mobilis (strain DSM 10674 / SJ95).;"
S12_scaffold_219_curated_12
Paenibacillus sp. FSL R5-192, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12139..12609)
DNA (471bp) protein (157aa)
EBSC protein n=1 Tax=Paenibacillus sp. PAMC 26794 RepID=UPI00037FB1B4
YbaK/prolyl-tRNA synthetase associated domain-containing protein {ECO:0000313|EMBL:ETT31431.1}; TaxID=1226754 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-192.;"
hypothetical protein
S12_scaffold_219_curated_13
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(12658..14556)
DNA (1899bp) protein (633aa)
Cobalamin B12-binding domain protein id=1856244 bin=GWE2_Firmicute_51_13 species=Thermotoga thermarum genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
cobalamin B12-binding domain-containing protein rbh
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_219_curated_14
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(14553..15638)
DNA (1086bp) protein (362aa)
NAD/NADP octopine/nopaline dehydrogenase id=1856259 bin=GWE2_Firmicute_51_13 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
NAD/NADP octopine/nopaline dehydrogenase
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_219_curated_15
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

15789..16658
DNA (870bp) protein (290aa)
DMT(Drug/metabolite transporter) superfamily permease id=2426390 bin=GWF1_Tenericute_35_14 species=Desulfosporosinus meridiei genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
membrane protein
Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
S12_scaffold_219_curated_16
Paenibacillus sp. E194, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16655..17392
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Bacillus sp. ZYK RepID=UPI0002FE1A79
Aldolase {ECO:0000313|EMBL:KJB87352.1}; TaxID=1458845 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. E194.;"
class II aldolase/adducin family protein
S12_scaffold_219_curated_17
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17389..18612
DNA (1224bp) protein (408aa)
mtrK; 5-methylribose kinase (EC:2.7.1.100) rbh
Methylthioribose kinase {ECO:0000256|HAMAP-Rule:MF_01683}; Short=MTR kinase {ECO:0000256|HAMAP-Rule:MF_01683};; EC=2.7.1.100 {ECO:0000256|HAMAP-Rule:MF_01683, ECO:0000313|EMBL:CBH20814.1};; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
Methylthioribose kinase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWJ9_CLOSD rbh
S12_scaffold_219_curated_18
Bacillaceae bacterium MTCC 8252, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18605..19672
DNA (1068bp) protein (356aa)
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; TaxID=1123719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; unclassified Bacillaceae.;" source="Bacillaceae bacterium MTCC 8252.;"
mtnA; putative Methylthioribose-1-phosphate isomerase (EC:5.3.1.23) rbh
Methylthioribose-1-phosphate isomerase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWK0_CLOSD rbh
S12_scaffold_219_curated_19
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19673..20233
DNA (561bp) protein (187aa)
GNAT family acetyltransferase n=1 Tax=Clostridium sp. JC122 RepID=UPI0002883C7F
Acetyltransferase family protein {ECO:0000313|EMBL:KIE46610.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
GCN5-related N-acetyltransferase
S12_scaffold_219_curated_20
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20385..21836
DNA (1452bp) protein (484aa)
Beta-Ig-H3/fasciclin n=1 Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0R9H0_CELLC
Fasciclin {ECO:0000313|EMBL:AHW59892.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
beta-Ig-H3/fasciclin
S12_scaffold_219_curated_21
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21890..22426
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I2S2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETA79489.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
putative heme-binding protein
S12_scaffold_219_curated_22
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22374..22802)
DNA (429bp) protein (143aa)
UV-endonuclease UvdE n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M1W1_CLOB8
uvsE2; UV damage endonuclease
Putative UV damage endonuclease {ECO:0000313|EMBL:AJH01544.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
S12_scaffold_219_curated_23
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

22939..24381
DNA (1443bp) protein (481aa)
DNA/RNA helicase (EC:5.99.1.-) rbh
DEAD/DEAH box helicase domain-containing protein id=3145856 bin=GWF2_Firmicute_51_9 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_51_9 organism_group=Firmicute rbh
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_219_curated_24
Halanaerobium hydrogeniformans, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24392..25177)
DNA (786bp) protein (262aa)
Patatin n=1 Tax=Halanaerobium hydrogeniformans RepID=E4RKP2_HALHG
patatin
Patatin {ECO:0000313|EMBL:ADQ15689.1}; Flags: Precursor;; TaxID=656519 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium hydrogeniformans (Halanaerobium sp. (strain; sapolanicus)).;"
S12_scaffold_219_curated_25
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25186..25572)
DNA (387bp) protein (129aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
mgsA1; methylglyoxal synthase MgsA (EC:4.2.3.3)
Methylglyoxal synthase n=1 Tax=Clostridium ultunense Esp RepID=M1ZGQ3_9CLOT
S12_scaffold_219_curated_26
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25661..26440)
DNA (780bp) protein (260aa)
Integral membrane protein n=1 Tax=Acholeplasma laidlawii (strain PG-8A) RepID=A9NE28_ACHLI rbh
integral membrane protein rbh
Tax=BJP_IG2157_Clostridiales_52_13
S12_scaffold_219_curated_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26610..28076
DNA (1467bp) protein (489aa)
hypothetical protein n=1 Tax=Paenibacillus sp. JC66 RepID=UPI0002880738 rbh
hypothetical protein
UPF0061 protein U729_448 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
S12_scaffold_219_curated_28
Thermoanaerobacter siderophilus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

28177..29094
DNA (918bp) protein (306aa)
Ribokinase n=1 Tax=Thermoanaerobacter siderophilus SR4 RepID=I9KR82_9THEO
Ribokinase {ECO:0000313|EMBL:EIV99393.1}; TaxID=880478 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter siderophilus SR4.;"
ribokinase
S12_scaffold_219_curated_29
Peptostreptococcaceae bacterium AS15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29265..30641
DNA (1377bp) protein (459aa)
SPFH domain/Band 7 family protein n=1 Tax=Eubacterium sp. AS15 RepID=J4TLP1_9FIRM rbh
SPFH domain/Band 7 family protein {ECO:0000313|EMBL:EJP25704.1}; TaxID=936556 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium AS15.;"
flotillin rbh
S12_scaffold_219_curated_30
unknown

Not on your lists

30740..31033
DNA (294bp) protein (98aa)

This feature has no annotations

Displaying items 1-30 of 81 in total

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