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S12_scaffold_139_curated

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Displaying items 1-30 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_139_curated_1
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(164..901)
DNA (738bp) protein (246aa)
Putative N-acetylmannosamine-6-phosphate 2-epimerase id=1765525 bin=GWE2_Firmicute_51_13 species=[Clostridium] spiroforme genus=unknown taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
N-acetylmannosamine-6-phosphate 2-epimerase
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_139_curated_2
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(888..1661)
DNA (774bp) protein (258aa)
Transcriptional regulator, DeoR family id=1765522 bin=GWE2_Firmicute_51_13 species=Sebaldella termitidis genus=Sebaldella taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
DeoR family transcriptional regulator
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_139_curated_3
Desulfosporosinus acidiphilus, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1965..4097
DNA (2133bp) protein (711aa)
HD-GYP domain-containing protein n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D3C4_DESAJ rbh
HD-GYP domain-containing protein rbh
HD-GYP domain-containing protein {ECO:0000313|EMBL:AFM40298.1}; TaxID=646529 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4).;"
S12_scaffold_139_curated_4
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

4327..5775
DNA (1449bp) protein (483aa)
5'-Nucleotidase domain protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LRD1_DESBD rbh
5'-nucleotidase domain-containing protein rbh
Tax=BJP_IG2069_Anaerolineales_43_63
S12_scaffold_139_curated_5
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

Not on your lists

5795..6337
DNA (543bp) protein (181aa)
GCN5-related N-acetyltransferase id=4081319 bin=GWA2_Tenericute_38_26 species=Mycoplasma fermentans genus=Mycoplasma taxon_order=Mycoplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
N-acetyltransferase GCN5
Tax=GWE2_Tenericutes_38_8_curated
S12_scaffold_139_curated_6
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

6440..7309
DNA (870bp) protein (290aa)
Core-2/I-Branching enzyme id=1765519 bin=GWE2_Firmicute_51_13 species=Erysipelotrichaceae bacterium 3_1_53 genus=unknown taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_139_curated_7
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(7318..8400)
DNA (1083bp) protein (361aa)
Sugar isomerase (SIS) id=1765516 bin=GWE2_Firmicute_51_13 species=Clostridium beijerinckii genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
phosphosugar-binding protein
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_139_curated_8
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(8397..8717)
DNA (321bp) protein (107aa)
Putative uncharacterized protein id=1765514 bin=GWE2_Firmicute_51_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_139_curated_9
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(8774..9607)
DNA (834bp) protein (278aa)
PTS system mannose/fructose/sorbose family IID component id=1765512 bin=GWE2_Firmicute_51_13 species=Sebaldella termitidis genus=Sebaldella taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
PTS system mannose/fructose/sorbose family transporter subunit IID rbh
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_139_curated_10
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(9609..10433)
DNA (825bp) protein (275aa)
Phosphotransferase system PTS sorbose-specific IIC subunit id=1765510 bin=GWE2_Firmicute_51_13 species=Sebaldella termitidis genus=Sebaldella taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
PTS sorbose-specific transporter subunit IIC rbh
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_139_curated_11
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(10486..10980)
DNA (495bp) protein (165aa)
Putative uncharacterized protein id=1765508 bin=GWE2_Firmicute_51_13 species=Coprobacillus sp. 8_2_54BFAA genus=Coprobacillus taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
PTS system sorbose subfamily transporter subunit IIB
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_139_curated_12
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(10992..11420)
DNA (429bp) protein (143aa)
Phosphotransferase system, mannose/fructose-specific component IIA (EC:2.7.1.69)
PTS system mannose-specific IIAB component id=4092072 bin=GWF2_Firmicute_51_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_139_curated_13
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(11505..11834)
DNA (330bp) protein (110aa)
Putative uncharacterized protein id=1765503 bin=GWE2_Firmicute_51_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_139_curated_14
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11849..12568)
DNA (720bp) protein (240aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VR12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75110.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
hypothetical protein
S12_scaffold_139_curated_15
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(12561..13265)
DNA (705bp) protein (235aa)
Putative N-acetylmannosamine-6-phosphate epimerase (EC:5.1.3.9)
Putative N-acetylmannosamine-6-phosphate 2-epimerase id=1765501 bin=GWE2_Firmicute_51_13 species=Leptotrichia goodfellowii genus=Leptotrichia taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_139_curated_16
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13281..15026)
DNA (1746bp) protein (582aa)
Putative uncharacterized protein id=1765497 bin=GWE2_Firmicute_51_13 species=Clostridium asparagiforme genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADL05547.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
S12_scaffold_139_curated_17
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

15330..17615
DNA (2286bp) protein (762aa)
Formate C-acetyltransferase id=1765578 bin=GWE2_Firmicute_51_13 species=Vibrio shilonii genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
pyruvate formate-lyase PFL rbh
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_139_curated_18
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

17608..18522
DNA (915bp) protein (305aa)
glycyl-radical enzyme activating protein family (EC:1.97.1.4)
Putative uncharacterized protein id=4091968 bin=GWF2_Firmicute_51_9 species=Clostridium hathewayi genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute rbh
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_139_curated_19
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

18531..19214
DNA (684bp) protein (228aa)
Putative uncharacterized protein id=4092132 bin=GWF2_Firmicute_51_9 species=Vibrio shilonii genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Firmicute_51_9 organism_group=Firmicute
GntR family transcriptional regulator
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_139_curated_20
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(19215..20153)
DNA (939bp) protein (313aa)
Phosphomannose isomerase (EC:5.3.1.8) rbh
Putative uncharacterized protein id=1765492 bin=GWE2_Firmicute_51_13 species=Enterococcus malodoratus genus=Enterococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_139_curated_21
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20229..21101
DNA (873bp) protein (291aa)
AP endonuclease, family 2 n=1 Tax=[Eubacterium] cylindroides ATCC 27803 RepID=U2NVN4_9FIRM
AP endonuclease, family 2 {ECO:0000313|EMBL:ERK42110.1}; TaxID=649755 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides ATCC 27803.;"
Xylose isomerase-like TIM barrel.
S12_scaffold_139_curated_22
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21066..21767)
DNA (702bp) protein (234aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
Deoxyribose-phosphate aldolase n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GDJ5_EUBLK
hypothetical protein
S12_scaffold_139_curated_23
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(21771..22703)
DNA (933bp) protein (311aa)
Phosphomannose isomerase (EC:5.3.1.8)
Mannose-6-phosphate isomerase, class I id=1765490 bin=GWE2_Firmicute_51_13 species=Erysipelotrichaceae bacterium 3_1_53 genus=unknown taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_139_curated_24
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(22696..23883)
DNA (1188bp) protein (396aa)
Mannose-6-phosphate isomerase, class I id=1765490 bin=GWE2_Firmicute_51_13 species=Erysipelotrichaceae bacterium 3_1_53 genus=unknown taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
N-acetylglucosamine-6-phosphate deacetylase
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_139_curated_25
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(23908..24546)
DNA (639bp) protein (213aa)
2-dehydro-3-deoxyphosphogluconate aldolase (EC:4.1.3.16)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase id=1765487 bin=GWE2_Firmicute_51_13 species=Geobacillus thermoglucosidasius genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_139_curated_26
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(24536..25492)
DNA (957bp) protein (319aa)
Putative phosphotriesterase id=1765486 bin=GWE2_Firmicute_51_13 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
aryldialkylphosphatase
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_139_curated_27
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(25482..26789)
DNA (1308bp) protein (436aa)
Uncharacterized protein id=1765485 bin=GWE2_Firmicute_51_13 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
hypothetical protein rbh
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_139_curated_28
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(26786..27562)
DNA (777bp) protein (259aa)
Short-chain dehydrogenase/reductase SDR id=4092140 bin=GWF2_Firmicute_51_9 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Firmicute_51_9 organism_group=Firmicute rbh
short-chain dehydrogenase/reductase SDR
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_139_curated_29
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(27559..28329)
DNA (771bp) protein (257aa)
Uncharacterized protein id=4092141 bin=GWF2_Firmicute_51_9 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWF2_Firmicute_51_9 organism_group=Firmicute rbh
hypothetical protein
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_139_curated_30
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28436..28951)
DNA (516bp) protein (172aa)
peptidyl-prolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MEW6_ALKOO
Displaying items 1-30 of 119 in total

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