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S12_scaffold_886_curated

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_886_curated_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..242)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000366D522
Cytochrome c-type biogenesis protein CycH {ECO:0000313|EMBL:CDX46341.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
cytochrome C-type biogenesis protein CcmI
S12_scaffold_886_curated_2
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(341..706)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FNF1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX80771.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein
S12_scaffold_886_curated_3
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(866..2290)
DNA (1425bp) protein (475aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y343_9RHIZ rbh
ATPase domain-containing protein rbh
S12_scaffold_886_curated_4
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2283..2981)
DNA (699bp) protein (233aa)
transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI00036D9821 rbh
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:ETA72082.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain rbh
S12_scaffold_886_curated_5
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3025..3324)
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I0H1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX35301.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
S12_scaffold_886_curated_6
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3421..3627)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MGE3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EXL10060.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
S12_scaffold_886_curated_7
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3679..7572)
DNA (3894bp) protein (1298aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000313A69A rbh
Host specificity protein {ECO:0000313|EMBL:EXL10061.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
phage host specificity protein rbh
S12_scaffold_886_curated_8
Brucella neotomae, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7584..8033)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Brucella neotomae 5K33 RepID=C9V9D7_BRUNE
Putative uncharacterized protein {ECO:0000313|EMBL:EEY04199.1}; TaxID=520456 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella neotomae 5K33.;"
nlpC/P60 family protein
S12_scaffold_886_curated_9
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8030..8920)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FC197F rbh
Uncharacterized protein {ECO:0000313|EMBL:KFB10644.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
hypothetical protein
S12_scaffold_886_curated_10
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8917..9567)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P030_9RHIZ
Glycoside hydrolase family 24 {ECO:0000313|EMBL:EZQ16838.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
S12_scaffold_886_curated_11
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9612..10187)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DCFB49
Tail protein {ECO:0000313|EMBL:EZQ16839.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
tail protein
S12_scaffold_886_curated_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10184..10360)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NDK4_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28687.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
S12_scaffold_886_curated_13
Brucella sp. 83/13, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10402..10740)
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=2 Tax=Brucella RepID=D1CWX1_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EEZ32575.1}; TaxID=520449 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. 83/13.;"
hypothetical protein
S12_scaffold_886_curated_14
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10737..11153)
DNA (417bp) protein (139aa)
tail protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030E8217
Tail protein {ECO:0000313|EMBL:EXL10068.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
Phage major tail protein, TP901-1 family
S12_scaffold_886_curated_15
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11323..11784
DNA (462bp) protein (154aa)
Mobile mystery protein A n=1 Tax=Rhizobium sp. CF122 RepID=J3BVK4_9RHIZ
mobile mystery protein A
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
S12_scaffold_886_curated_16
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11781..12377
DNA (597bp) protein (199aa)
Mobile mystery protein B n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07L42_RHOP5 rbh
mobile mystery protein B rbh
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
S12_scaffold_886_curated_17
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12397..12810)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000304ECE4
Uncharacterized protein {ECO:0000313|EMBL:EXL10069.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
S12_scaffold_886_curated_18
unknown

Not on your lists

comp(12791..12973)
DNA (183bp) protein (61aa)

This feature has no annotations

S12_scaffold_886_curated_19
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12976..13311)
DNA (336bp) protein (112aa)
Phage head-tail adaptor n=1 Tax=Nitratireductor indicus C115 RepID=K2NMJ3_9RHIZ
Head-tail adaptor protein {ECO:0000313|EMBL:EXL10070.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
head-tail adaptor protein
S12_scaffold_886_curated_20
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13311..13880)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031C5834
Uncharacterized protein {ECO:0000313|EMBL:EXL10071.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
PhiE125 gp8 family protein
S12_scaffold_886_curated_21
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14207..15460)
DNA (1254bp) protein (418aa)
capsid protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F99A35 rbh
Capsid protein {ECO:0000313|EMBL:EXL10072.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
capsid protein
S12_scaffold_886_curated_22
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15463..16080)
DNA (618bp) protein (206aa)
primosome assembly protein PriA n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000314B236
HK97 family phage prohead protease {ECO:0000313|EMBL:EKF40632.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
phage prohead protease HK97 family
S12_scaffold_886_curated_23
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16308..16634)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030FD767
Uncharacterized protein {ECO:0000313|EMBL:EKF40631.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
Hypothetical protein
S12_scaffold_886_curated_24
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16783..17949)
DNA (1167bp) protein (389aa)
Phage portal protein, HK97 family protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LPZ1_9RHIZ rbh
Portal protein {ECO:0000313|EMBL:EZQ16849.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
phage portal protein, HK97 family
S12_scaffold_886_curated_25
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18180..19559)
DNA (1380bp) protein (460aa)
Phage DNA packaging protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MGF2_9RHIZ rbh
Phage DNA packaging protein {ECO:0000313|EMBL:EKF19785.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
Phage DNA packaging protein rbh
Displaying 25 items

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