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S12_scaffold_120_curated

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Displaying items 1-30 of 185 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_120_curated_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..392
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN09_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57876.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
S12_scaffold_120_curated_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(552..2408)
DNA (1857bp) protein (619aa)
Aspartyl-tRNA synthetase / asparaginyl-tRNA synthetase (Aspartate-/asparagine-tRNA ligase) (AspRS) {ECO:0000313|EMBL:CDX24655.1}; EC=6.1.1.12 {ECO:0000313|EMBL:CDX24655.1};; EC=6.1.1.22 {ECO:0000313|EMBL:CDX24655.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12) rbh
Aspartate--tRNA ligase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSJ1_9RHIZ rbh
S12_scaffold_120_curated_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2511..2801)
DNA (291bp) protein (97aa)
Plasmid stabilization system n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSJ2_9RHIZ
Plasmid stabilization system {ECO:0000313|EMBL:EHK56311.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
plasmid stabilization system
S12_scaffold_120_curated_4
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2816..3079)
DNA (264bp) protein (88aa)
Putative addiction module antidote protein, CopG/Arc/MetJ family n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSJ3_9RHIZ
Putative addiction module antidote protein, CopG/Arc/MetJ family {ECO:0000313|EMBL:AGO88434.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
putative addiction module antidote protein, CopG/Arc/MetJ family
S12_scaffold_120_curated_5
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3173..4465
DNA (1293bp) protein (431aa)
Major facilitator superfamily protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSJ4_9RHIZ rbh
Major facilitator superfamily protein {ECO:0000313|EMBL:EHK56313.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
major facilitator superfamily protein rbh
S12_scaffold_120_curated_6
Mesorhizobium sp. LNJC395A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4544..5701
DNA (1158bp) protein (386aa)
ribonuclease D (EC:3.1.13.5) rbh
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=1287275 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC395A00.;"
ribonuclease D n=1 Tax=Hoeflea sp. 108 RepID=UPI000363D285 rbh
S12_scaffold_120_curated_7
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5756..7267)
DNA (1512bp) protein (504aa)
Ppx/GppA phosphatase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUT8_9RHIZ rbh
Ppx/GppA phosphatase {ECO:0000313|EMBL:EHK55524.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Ppx/GppA phosphatase rbh
S12_scaffold_120_curated_8
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7264..9474)
DNA (2211bp) protein (737aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
polyphosphate kinase (EC:2.7.4.1) rbh
Polyphosphate kinase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUT7_9RHIZ rbh
S12_scaffold_120_curated_9
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9673..9918
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KQR3_MESAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESY91782.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
S12_scaffold_120_curated_10
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9932..11167
DNA (1236bp) protein (412aa)
FAD dependent oxidoreductase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TJJ9_MESCW rbh
FAD dependent oxidoreductase rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:ADV13761.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S12_scaffold_120_curated_11
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11180..11863)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J2L8F2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ29797.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
Probable urease-associated protein
S12_scaffold_120_curated_12
Mesorhizobium sp. L2C067A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11885..12688)
DNA (804bp) protein (268aa)
Arginine ABC transporter ATP-binding protein n=5 Tax=Mesorhizobium RepID=V7F0Z4_9RHIZ rbh
Arginine ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESZ35849.1}; TaxID=1287106 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C067A000.;"
ABC transporter rbh
S12_scaffold_120_curated_13
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12699..13856)
DNA (1158bp) protein (386aa)
Amino acid ABC transporter permease n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUT3_9RHIZ rbh
Amino acid ABC transporter permease {ECO:0000313|EMBL:EHK55519.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein
S12_scaffold_120_curated_14
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13866..15056)
DNA (1191bp) protein (397aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUT2_9RHIZ rbh
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:EHK55518.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
polar amino acid ABC transporter inner membrane subunit rbh
S12_scaffold_120_curated_15
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15122..16153)
DNA (1032bp) protein (344aa)
Cationic amino acid ABC transporter periplasmic binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUT1_9RHIZ rbh
Cationic amino acid ABC transporter periplasmic binding protein {ECO:0000313|EMBL:EHK55517.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
amino acid ABC transporter substrate-binding protein rbh
S12_scaffold_120_curated_16
Mesorhizobium sp. LSJC264A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16514..17689
DNA (1176bp) protein (392aa)
Cystathionine beta-lyase n=2 Tax=Mesorhizobium RepID=V7F3D0_9RHIZ rbh
Cystathionine beta-lyase {ECO:0000313|EMBL:ESX24660.1}; TaxID=1287321 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC264A00.;"
cystathionine beta-lyase rbh
S12_scaffold_120_curated_trna_1
unknown

Not on your lists

17781..17854
DNA (74bp)
transferRNA Pro
S12_scaffold_120_curated_17
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17918..18223
DNA (306bp) protein (102aa)
ETC complex I subunit n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031C5DA9
ETC complex I subunit conserved region {ECO:0000313|EMBL:EHK55502.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ETC complex I subunit conserved region
S12_scaffold_120_curated_trna_2
unknown

Not on your lists

18246..18319
DNA (74bp)
transferRNA Arg
S12_scaffold_120_curated_18
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18429..18704
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMI6_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK58044.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
S12_scaffold_120_curated_19
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18720..19430)
DNA (711bp) protein (237aa)
UPI0003CFF74B related cluster n=1 Tax=unknown RepID=UPI0003CFF74B rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ17843.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
Chromosomal replication initiator DnaA
S12_scaffold_120_curated_20
Mesorhizobium sp. LSJC285A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19438..20643)
DNA (1206bp) protein (402aa)
UPI0003CE9EE2 related cluster n=1 Tax=unknown RepID=UPI0003CE9EE2 rbh
Membrane protein {ECO:0000313|EMBL:ESW80803.1}; TaxID=1287338 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC285A00.;"
hypothetical protein rbh
S12_scaffold_120_curated_21
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20618..21172)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BRJ4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM72196.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein
S12_scaffold_120_curated_22
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21376..22440
DNA (1065bp) protein (355aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
phosphoribosylaminoimidazole synthetase (EC:6.3.3.1) rbh
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQE6_9RHIZ rbh
S12_scaffold_120_curated_23
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22437..23138
DNA (702bp) protein (234aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003725265 rbh
phosphoribosylglycinamide formyltransferase
S12_scaffold_120_curated_24
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23128..25266)
DNA (2139bp) protein (713aa)
nitrate reductase (EC:1.7.99.4) rbh
UPI0003CF90FF related cluster n=1 Tax=unknown RepID=UPI0003CF90FF rbh
Dehydrogenase {ECO:0000313|EMBL:ESY66568.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
S12_scaffold_120_curated_25
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25345..26205
DNA (861bp) protein (287aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; 23S rRNA m6A2030 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
lactate dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI000368A6E3 rbh
hypothetical protein rbh
S12_scaffold_120_curated_26
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26262..26693
DNA (432bp) protein (144aa)
UPI0003D03DD2 related cluster n=1 Tax=unknown RepID=UPI0003D03DD2
Uncharacterized protein {ECO:0000313|EMBL:ESZ17878.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
S12_scaffold_120_curated_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26707..27411
DNA (705bp) protein (235aa)
Ribonuclease T2 n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N869_9RHIZ
Ribonuclease T2 {ECO:0000313|EMBL:EHK57021.1}; Flags: Fragment;; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ribonuclease T2
S12_scaffold_120_curated_28
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27499..28098
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000369253D
Glutathione S-transferase domain-containing protein {ECO:0000313|EMBL:EHK57027.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Glutathione S-transferase family protein
Displaying items 1-30 of 185 in total

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