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S12_scaffold_172_curated

Search features with annotation key words

Displaying items 1-30 of 247 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_172_curated_1
unknown

Not on your lists

3..179
DNA (177bp) protein (59aa)

This feature has no annotations

S12_scaffold_172_curated_2
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

321..3017
DNA (2697bp) protein (899aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
UvrD/REP helicase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YFZ1_MESOW rbh
UvrD/REP helicase rbh
S12_scaffold_172_curated_3
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3431..3718)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EJJ9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX11575.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
putative endonuclease containing a URI domain
S12_scaffold_172_curated_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4089..4307
DNA (219bp) protein (73aa)
Alkilphosphonate uptake protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IMP1_AZOC5
PhnA protein {ECO:0000313|EMBL:KIZ32528.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
alkilphosphonate uptake protein
S12_scaffold_172_curated_5
unknown

Not on your lists

4433..4858
DNA (426bp) protein (142aa)

This feature has no annotations

S12_scaffold_172_curated_6
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4982..5761)
DNA (780bp) protein (260aa)
UPI0003CDD439 related cluster n=1 Tax=unknown RepID=UPI0003CDD439 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESW86379.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
ErfK/YbiS/YcfS/YnhG family protein rbh
S12_scaffold_172_curated_7
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6169..7044
DNA (876bp) protein (292aa)
short-chain dehydrogenase n=1 Tax=Rhizobium loti RepID=UPI00037E7EB5 rbh
Short chain dehydrogenase family protein {ECO:0000313|EMBL:AID30962.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
short-chain dehydrogenase/reductase SDR rbh
S12_scaffold_172_curated_8
unknown

Not on your lists

comp(7079..7642)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Deinococcus aquatilis RepID=UPI00037D55E6
Uncharacterized protein {ECO:0000313|EMBL:CPR15859.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
S12_scaffold_172_curated_9
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7703..8335)
DNA (633bp) protein (211aa)
Phosphonate metabolim protein, transferase hexapeptide repeat family n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TF72_MESCW rbh
phosphonate metabolism protein rbh
Phosphonate metabolim protein, transferase hexapeptide repeat family {ECO:0000313|EMBL:ADV12292.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S12_scaffold_172_curated_10
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8378..8860)
DNA (483bp) protein (161aa)
CreA family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTF6_9RHIZ
CreA family protein {ECO:0000313|EMBL:EHK55934.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
CreA family protein
S12_scaffold_172_curated_11
unknown

Not on your lists

8982..9143
DNA (162bp) protein (54aa)

This feature has no annotations

S12_scaffold_172_curated_12
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9214..9768
DNA (555bp) protein (185aa)
UPI0003CFE165 related cluster n=1 Tax=unknown RepID=UPI0003CFE165
Sco copper chaperone family protein {ECO:0000313|EMBL:ESZ20324.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems
S12_scaffold_172_curated_13
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9773..10645
DNA (873bp) protein (291aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Ribosomal protein L11 methyltransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTF9_9RHIZ rbh
ribosomal protein L11 methylase rbh
S12_scaffold_172_curated_14
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10726..10911)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NZL7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF43379.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
S12_scaffold_172_curated_15
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11135..12985
DNA (1851bp) protein (617aa)
X-Pro aminopeptidase n=1 Tax=Hoeflea sp. 108 RepID=UPI000365F84B rbh
Peptidase M24 {ECO:0000313|EMBL:EHK55940.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
peptidase M24 rbh
S12_scaffold_172_curated_16
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12970..13266)
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTG3_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK55941.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
branched-chain amino acid transport
S12_scaffold_172_curated_17
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13263..14018)
DNA (756bp) protein (252aa)
AzlC family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTG4_9RHIZ rbh
AzlC family protein {ECO:0000313|EMBL:EHK55942.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein rbh
S12_scaffold_172_curated_18
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14112..16259)
DNA (2148bp) protein (716aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ligA; DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTG7_9RHIZ rbh
S12_scaffold_172_curated_19
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16433..16933)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PEL4_9DELT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD41527.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
S12_scaffold_172_curated_20
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17019..18686)
DNA (1668bp) protein (556aa)
UPI0003CDF507 related cluster n=1 Tax=unknown RepID=UPI0003CDF507 rbh
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
DNA repair protein RecN rbh
S12_scaffold_172_curated_21
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18706..19572)
DNA (867bp) protein (289aa)
Outer membrane protein assembly factor BamD n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTH0_9RHIZ rbh
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
outer membrane assembly lipoprotein YfiO rbh
S12_scaffold_172_curated_22
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19702..20652)
DNA (951bp) protein (317aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041386};; UDP-3-O-acyl-GlcNAc deacetylase {ECO:0000256|HAMAP-Rule:MF_00388}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTH1_9RHIZ rbh
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase rbh
S12_scaffold_172_curated_23
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20932..22557)
DNA (1626bp) protein (542aa)
Cell division protein FtsZ n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTH2_9RHIZ rbh
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
cell division protein FtsZ rbh
S12_scaffold_172_curated_24
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22631..23938)
DNA (1308bp) protein (436aa)
Cell division protein ftsA n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTH3_9RHIZ rbh
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
cell division protein FtsA rbh
S12_scaffold_172_curated_25
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23935..24873)
DNA (939bp) protein (313aa)
Cell division protein FtsQ n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTH4_9RHIZ rbh
Cell division protein FtsQ {ECO:0000256|HAMAP-Rule:MF_00911, ECO:0000256|SAAS:SAAS00006985}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
cell division protein FtsQ rbh
S12_scaffold_172_curated_26
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24861..25802)
DNA (942bp) protein (314aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4) rbh
UPI0003CFBC41 related cluster n=1 Tax=unknown RepID=UPI0003CFBC41 rbh
S12_scaffold_172_curated_27
Mesorhizobium sp. L2C066B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26084..27052)
DNA (969bp) protein (323aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C066B000.;"
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158) rbh
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031BEF86 rbh
S12_scaffold_172_curated_28
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27049..28455)
DNA (1407bp) protein (469aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TF55_MESCW rbh
UDP-N-acetylmuramate--L-alanine ligase rbh
S12_scaffold_172_curated_29
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28452..29579)
DNA (1128bp) protein (376aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
UDP-diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase n=1 Tax=Rhizobium loti RepID=UPI00036DD8A8 rbh
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase rbh
S12_scaffold_172_curated_30
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29583..30737)
DNA (1155bp) protein (385aa)
Cell division protein FtsW n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTI1_9RHIZ rbh
Cell division protein FtsW {ECO:0000313|EMBL:EHK55959.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
cell division protein FtsW rbh
Displaying items 1-30 of 247 in total

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