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S12_scaffold_170_curated

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Displaying items 1-30 of 108 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_170_curated_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..415)
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPI0_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57352.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
S12_scaffold_170_curated_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

596..1675
DNA (1080bp) protein (360aa)
AraC family transcriptional regulator n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00034DFBD9
Uncharacterized protein {ECO:0000313|EMBL:KIZ44974.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
AraC family transcriptional regulator
S12_scaffold_170_curated_3
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1895..6337
DNA (4443bp) protein (1481aa)
Putative Outer membrane autotransporter barrel domain protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SA66_9BRAD
Putative Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:CCD91093.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
outer membrane autotransporter barrel
S12_scaffold_170_curated_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6924..8057
DNA (1134bp) protein (378aa)
Ornithine decarboxylase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNT0_9RHIZ rbh
Ornithine decarboxylase {ECO:0000313|EMBL:EHK57625.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ornithine decarboxylase rbh
S12_scaffold_170_curated_5
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8258..8830
DNA (573bp) protein (191aa)
Acetyltransferase n=1 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GRQ6_9RHIZ
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEH86446.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
S12_scaffold_170_curated_6
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8924..9217
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0IKR6_LEPFC
hypothetical protein
Tax=BJP_08E140C01_Roseovarius_63_250
S12_scaffold_170_curated_7
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9223..9528
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000380FFFD
Transcriptional regulator {ECO:0000313|EMBL:EIZ84175.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
hypothetical protein
S12_scaffold_170_curated_8
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9532..9990)
DNA (459bp) protein (153aa)
MerR family transcriptional regulator n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LSB8_9BURK
MerR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
S12_scaffold_170_curated_9
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9998..10279)
DNA (282bp) protein (94aa)
Putative sterol carrier protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KIR5_MESAW
putative sterol carrier protein
Sterol-binding protein {ECO:0000313|EMBL:ESY96290.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
S12_scaffold_170_curated_10
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10443..11318
DNA (876bp) protein (292aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3HYU3_RHOVT rbh
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
S12_scaffold_170_curated_11
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11318..12928
DNA (1611bp) protein (537aa)
carboxyl transferase (EC:6.4.1.3) rbh
Carboxyl transferase {ECO:0000313|EMBL:BAL96626.1}; EC=6.4.1.3 {ECO:0000313|EMBL:BAL96626.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Carboxyl transferase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUD9_RUBGI rbh
S12_scaffold_170_curated_12
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13333..14505
DNA (1173bp) protein (391aa)
acyl-CoA dehydrogenase (EC:1.3.99.3) rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:BAL96627.1}; EC=1.3.99.3 {ECO:0000313|EMBL:BAL96627.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Acyl-CoA dehydrogenase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUE0_RUBGI rbh
S12_scaffold_170_curated_13
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14505..15374
DNA (870bp) protein (290aa)
enoyl-CoA hydratase/isomerase (EC:4.2.1.17)
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:BAL96628.1}; EC=4.2.1.17 {ECO:0000313|EMBL:BAL96628.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Enoyl-CoA hydratase/isomerase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUE1_RUBGI
S12_scaffold_170_curated_14
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15374..17392
DNA (2019bp) protein (673aa)
Carbamoyl-phosphate synthase L chain, ATP-binding n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUE2_RUBGI rbh
carbamoyl-phosphate synthase subunit L rbh
Carbamoyl-phosphate synthase L chain, ATP-binding {ECO:0000313|EMBL:BAL96629.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
S12_scaffold_170_curated_15
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17385..18248
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I3H8_RHOVT rbh
Uncharacterized protein {ECO:0000313|EMBL:KAI94560.1}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;"
hypothetical protein rbh
S12_scaffold_170_curated_16
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18301..20163
DNA (1863bp) protein (621aa)
Feruloyl-CoA synthase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I238_9RHIZ rbh
Feruloyl-CoA synthase {ECO:0000313|EMBL:EHK52924.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
feruloyl-CoA synthetase rbh
S12_scaffold_170_curated_17
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20167..21411
DNA (1245bp) protein (415aa)
Acetyl-CoA acetyltransferase n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2KT36_9PROT rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EKF08844.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
acetyl-CoA acetyltransferase rbh
S12_scaffold_170_curated_18
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21411..21860
DNA (450bp) protein (150aa)
Putative 4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I235_9RHIZ
4-hydroxybenzoyl-CoA thioesterase family active site protein {ECO:0000313|EMBL:KFC71211.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
thioesterase superfamily protein
S12_scaffold_170_curated_19
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21832..22347)
DNA (516bp) protein (172aa)
Transcriptional regulator MarR family protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BYL2_9RHIZ
Transcriptional regulator MarR family protein {ECO:0000313|EMBL:EIM74664.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
transcriptional regulator, MarR family
S12_scaffold_170_curated_20
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22630..23424
DNA (795bp) protein (265aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:KGM50453.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KGM50453.1};; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S11g.;"
crt; 3-hydroxybutyryl-CoA dehydratase Crt (EC:4.2.1.55)
Enoyl-CoA hydratase/isomerase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I233_9RHIZ rbh
S12_scaffold_170_curated_21
Mesorhizobium sp. LNJC399B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23437..23964)
DNA (528bp) protein (176aa)
UPI0003CE8CAA related cluster n=1 Tax=unknown RepID=UPI0003CE8CAA
Uncharacterized protein {ECO:0000313|EMBL:ESY07652.1}; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC399B00.;"
hypothetical protein
S12_scaffold_170_curated_22
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23961..24413)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11LQ3_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXL09532.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
S12_scaffold_170_curated_23
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24436..24987)
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNT5_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57630.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
S12_scaffold_170_curated_24
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25065..25448)
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNU1_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57603.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
S12_scaffold_170_curated_25
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25451..26203)
DNA (753bp) protein (251aa)
flagellar biosynthesis protein FliR n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030B5578 rbh
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
fliR; flagellar biosynthesis protein FliR rbh
S12_scaffold_170_curated_26
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26200..28287)
DNA (2088bp) protein (696aa)
Flagellar biosynthesis protein FlhA n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y292_9RHIZ rbh
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:EHH14075.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
flagellar biosynthesis protein FlhA rbh
S12_scaffold_170_curated_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28385..28651)
DNA (267bp) protein (89aa)
Flagellar biosynthesis protein FliQ n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNU5_9RHIZ
Flagellar biosynthesis protein FliQ {ECO:0000313|EMBL:EHK57586.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
flagellar biosynthetic protein FliQ
S12_scaffold_170_curated_28
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28655..29053)
DNA (399bp) protein (133aa)
Flagellar basal body rod modification protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNU6_9RHIZ
Flagellar basal body rod modification protein {ECO:0000313|EMBL:EHK57587.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
flgD; flagellar basal body rod modification protein
S12_scaffold_170_curated_29
Mesorhizobium sp. L103C105A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29053..29496)
DNA (444bp) protein (148aa)
Flagellar biosynthesis repressor FlbT n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G5D6_9RHIZ
Probable flagellum biosynthesis repressor protein FlbT {ECO:0000256|HAMAP-Rule:MF_00783}; TaxID=1287074 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C105A0.;"
flagellar FlbT family protein
S12_scaffold_170_curated_30
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29493..29840)
DNA (348bp) protein (116aa)
Flagellar biosynthesis regulatory protein FlaF n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNU8_9RHIZ
Flagellar biosynthesis regulatory protein FlaF {ECO:0000313|EMBL:EHK57589.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
flagellar biosynthesis regulator FlaF
Displaying items 1-30 of 108 in total

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