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S12_scaffold_317_curated

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_317_curated_1
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..609)
DNA (609bp) protein (203aa)
LysM domain protein 2 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HJT9_ACHXA
LysM domain-containing protein 2
LysM domain protein 2 {ECO:0000313|EMBL:ADP15561.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
S12_scaffold_317_curated_2
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(850..1377)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y1B8_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH89403.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
S12_scaffold_317_curated_3
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1776..2957
DNA (1182bp) protein (394aa)
Putative uncharacterized protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AFE1_RHIET
Uncharacterized protein {ECO:0000313|EMBL:EGE56830.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
hypothetical protein rbh
S12_scaffold_317_curated_4
unknown

Not on your lists

3084..3209
DNA (126bp) protein (42aa)

This feature has no annotations

S12_scaffold_317_curated_5
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3372..4643)
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI0003803036
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA19266.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
S12_scaffold_317_curated_6
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4706..5920)
DNA (1215bp) protein (405aa)
Putative two-component response regulator n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YHP6_MOBAS rbh
Putative two-component response regulator {ECO:0000313|EMBL:EAS49533.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
putative CheY-like receiver fused with EAL domain
S12_scaffold_317_curated_7
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5943..8648
DNA (2706bp) protein (902aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
Putative sensor histidine kinase, response regulator n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YHP7_MOBAS rbh
Multi-sensor hybrid histidine kinase
S12_scaffold_317_curated_8
unknown

Not on your lists

8894..9019
DNA (126bp) protein (42aa)

This feature has no annotations

S12_scaffold_317_curated_9
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9039..9566)
DNA (528bp) protein (176aa)
Putative GreA/GreB family elongation factor n=1 Tax=Rhizobium sp. RepID=L0NCT2_RHISP
Uncharacterized protein {ECO:0000313|EMBL:KJS10177.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
nucleoside diphosphate kinase regulator domain-containing protein
S12_scaffold_317_curated_10
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9700..10143)
DNA (444bp) protein (148aa)
GreA/GreB family elongation factor n=1 Tax=Rhizobium sp. RepID=L0NF21_RHISP
GreA/GreB family elongation factor {ECO:0000313|EMBL:CCF18922.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
nucleoside diphosphate kinase regulator protein
S12_scaffold_317_curated_11
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10464..10862)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K807_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE79039.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
endoribonuclease L-PSP
S12_scaffold_317_curated_12
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11028..11624
DNA (597bp) protein (199aa)
Transcriptional regulator n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P2R2_AZOS1
TetR family transcriptional regulator {ECO:0000313|EMBL:KGJ12675.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
transcriptional regulator
S12_scaffold_317_curated_13
Pseudomonas sp. AAC, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11754..12866
DNA (1113bp) protein (371aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. AAC.;"
Putative ATP-binding component of ABC transporter n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HUB6_PSEUO rbh
spermidine/putrescine ABC transporter ATPase rbh
S12_scaffold_317_curated_14
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12922..13977
DNA (1056bp) protein (352aa)
Spermidine/putrescine-binding periplasmic protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QP65_9BRAD rbh
Spermidine/putrescine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJR61423.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
potD; spermidine/putrescine transport system substrate-binding protein rbh
S12_scaffold_317_curated_15
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14010..15239
DNA (1230bp) protein (410aa)
Binding-protein dependent transport system inner membrane protein n=2 Tax=Rhodospirillum rubrum RepID=G2TBX5_RHORU rbh
binding-protein dependent transport system inner membrane protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABC22846.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
S12_scaffold_317_curated_16
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15243..16070
DNA (828bp) protein (276aa)
Spermidine Putrescine ABC transporter permease component potC n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HHM5_9PROT rbh
Spermidine Putrescine ABC transporter permease component potC {ECO:0000313|EMBL:EKV28111.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
binding-protein-dependent transport system inner membrane protein rbh
S12_scaffold_317_curated_17
unknown

Not on your lists

16606..17016
DNA (411bp) protein (137aa)

This feature has no annotations

S12_scaffold_317_curated_18
unknown

Not on your lists

17162..17383
DNA (222bp) protein (74aa)

This feature has no annotations

S12_scaffold_317_curated_19
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17466..19760
DNA (2295bp) protein (765aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGQ1_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:AHY52441.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
hypothetical protein rbh
S12_scaffold_317_curated_20
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20327..22474
DNA (2148bp) protein (716aa)
penicillin-binding protein, 1A family (EC:2.4.1.129) rbh
1A family penicillin-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I0F1_9RHIZ rbh
1A family penicillin-binding protein {ECO:0000313|EMBL:EHK53539.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
S12_scaffold_317_curated_21
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22561..23145
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EK65_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV05149.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
S12_scaffold_317_curated_22
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23138..23680
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TMQ4_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV13999.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S12_scaffold_317_curated_23
unknown

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comp(23686..23889)
DNA (204bp) protein (68aa)

This feature has no annotations

S12_scaffold_317_curated_24
unknown

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comp(24103..24303)
DNA (201bp) protein (67aa)

This feature has no annotations

S12_scaffold_317_curated_25
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24519..25307
DNA (789bp) protein (263aa)
Diguanylate cyclase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HYE0_9RHIZ
Diguanylate cyclase {ECO:0000313|EMBL:EHK54278.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
diguanylate cyclase
S12_scaffold_317_curated_26
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25461..26459
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ELT9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV05145.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
S12_scaffold_317_curated_27
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26446..26793)
DNA (348bp) protein (116aa)
UPI0003CF3AB6 related cluster n=1 Tax=unknown RepID=UPI0003CF3AB6
Uncharacterized protein {ECO:0000313|EMBL:ESY69729.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein
S12_scaffold_317_curated_28
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26818..27591)
DNA (774bp) protein (258aa)
UPI0003CFF316 related cluster n=1 Tax=unknown RepID=UPI0003CFF316
Peptidoglycan-binding protein {ECO:0000313|EMBL:ESY97771.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
putative peptidoglycan-binding domain-containing protein
S12_scaffold_317_curated_29
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27566..29341)
DNA (1776bp) protein (592aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
UPI0003CE02B8 related cluster n=1 Tax=unknown RepID=UPI0003CE02B8 rbh
integral membrane sensor signal transduction histidine kinase rbh
S12_scaffold_317_curated_30
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29796..30155
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003674492
Putative uncharacterized protein {ECO:0000313|EMBL:EHK53592.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
Displaying items 1-30 of 64 in total

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