ggKbase home page

S12_scaffold_217_curated

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_217_curated_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1085)
DNA (1083bp) protein (361aa)
ABC transporter ATP-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HP46_9RHIZ rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EHK57500.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
choline ABC transporter, ATP-binding protein rbh
S12_scaffold_217_curated_2
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1082..1936)
DNA (855bp) protein (285aa)
UPI0003CFDDA0 related cluster n=1 Tax=unknown RepID=UPI0003CFDDA0 rbh
ABC transporter permease {ECO:0000313|EMBL:ESZ18992.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
choline ABC transporter permease rbh
S12_scaffold_217_curated_3
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2157..3095)
DNA (939bp) protein (313aa)
UPI0003D0084D related cluster n=1 Tax=unknown RepID=UPI0003D0084D rbh
Glycine/betaine ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESZ18993.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
Choline ABC transporter periplasmic binding protein rbh
S12_scaffold_217_curated_4
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3325..3936
DNA (612bp) protein (204aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
thymidine kinase (EC:2.7.1.21) rbh
thymidine kinase n=1 Tax=Hoeflea sp. 108 RepID=UPI000364E674 rbh
S12_scaffold_217_curated_5
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4043..4516
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035DD5D8
Uncharacterized protein {ECO:0000313|EMBL:KEQ10948.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
Lectin-like protein BA14k
S12_scaffold_217_curated_6
unknown

Not on your lists

comp(4636..4761)
DNA (126bp) protein (42aa)

This feature has no annotations

S12_scaffold_217_curated_7
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4830..5093
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003703098
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
30S ribosomal protein S21
S12_scaffold_217_curated_8
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5209..6303
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5FAE6_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV08866.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein rbh
S12_scaffold_217_curated_9
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6575..7717
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003713184 rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57496.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein rbh
S12_scaffold_217_curated_10
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7849..9756
DNA (1908bp) protein (636aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HP41_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57495.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein rbh
S12_scaffold_217_curated_11
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9873..10124
DNA (252bp) protein (84aa)
Prevent-host-death family protein n=2 Tax=Rhodopseudomonas palustris RepID=B3QAM4_RHOPT
Uncharacterized protein {ECO:0000313|EMBL:KJS08479.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
prevent-host-death family protein
S12_scaffold_217_curated_12
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10229..10540
DNA (312bp) protein (104aa)
Toxin of toxin-antitoxin (TA) system, containing PIN domain for nucleic acid binding protein id=4886482 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Rickettsia taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Toxin of toxin-antitoxin (TA) system, containing PIN domain for nucleic acid binding protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
S12_scaffold_217_curated_13
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10688..11974
DNA (1287bp) protein (429aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HP40_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX54553.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein rbh
S12_scaffold_217_curated_14
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12010..13134
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MJS2_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EKF17437.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein rbh
S12_scaffold_217_curated_15
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13112..14407)
DNA (1296bp) protein (432aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
baeS; signal transduction histidine-protein kinase BaeS (EC:2.7.13.3) rbh
Sensor protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSG9_9RHIZ rbh
S12_scaffold_217_curated_16
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14404..15114)
DNA (711bp) protein (237aa)
chemotaxis protein CheY n=1 Tax=Rhizobium meliloti RepID=UPI000361B537 rbh
putative two component transcriptional regulator rbh
Putative two component transcriptional regulator {ECO:0000313|EMBL:CCE97528.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
S12_scaffold_217_curated_17
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15151..15699)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A1E7_RHIFH
Membrane protein {ECO:0000313|EMBL:EZQ12947.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
S12_scaffold_217_curated_18
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15973..16218
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6L949_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW09998.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
S12_scaffold_217_curated_19
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16199..16699
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J5PDN0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW09997.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
S12_scaffold_217_curated_20
Mesorhizobium sp. L2C054A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16770..18509
DNA (1740bp) protein (580aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1287100 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C054A000.;"
Formate--tetrahydrofolate ligase (EC:6.3.4.3) rbh
UPI0003CFAB8A related cluster n=1 Tax=unknown RepID=UPI0003CFAB8A rbh
S12_scaffold_217_curated_21
unknown

Not on your lists

18587..18808
DNA (222bp) protein (74aa)

This feature has no annotations

S12_scaffold_217_curated_22
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18869..19639)
DNA (771bp) protein (257aa)
Mll2772 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98HP6_RHILO rbh
hypothetical protein rbh
Mll2772 protein {ECO:0000313|EMBL:BAB49820.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
S12_scaffold_217_curated_23
Mesorhizobium sp. L2C054A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19825..20880
DNA (1056bp) protein (352aa)
UPI0003CEB4E8 related cluster n=1 Tax=unknown RepID=UPI0003CEB4E8 rbh
Peptidase M14 {ECO:0000313|EMBL:ESZ46811.1}; TaxID=1287100 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C054A000.;"
succinylglutamate desuccinylase/aspartoacylase rbh
S12_scaffold_217_curated_24
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20974..21690
DNA (717bp) protein (239aa)
Phosphoesterase, PA-phosphatase related protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11G83_MESSB
Phosphoesterase, PA-phosphatase related protein {ECO:0000313|EMBL:KFB09442.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
PA-phosphatase-like phosphoesterase
S12_scaffold_217_curated_25
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21687..22511
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI0003808D98
Uncharacterized protein {ECO:0000313|EMBL:KFB09443.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
hypothetical protein
S12_scaffold_217_curated_26
Mesorhizobium sp. LSJC277A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22744..24933
DNA (2190bp) protein (730aa)
Anthranilate synthase subunit I {ECO:0000313|EMBL:ESW66569.1}; EC=4.1.3.27 {ECO:0000313|EMBL:ESW66569.1};; TaxID=1287334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC277A00.;"
UPI0003CDEC78 related cluster n=1 Tax=unknown RepID=UPI0003CDEC78 rbh
anthranilate synthase rbh
S12_scaffold_217_curated_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25076..25984
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HP27_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57512.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
cation diffusion facilitator family transporter rbh
S12_scaffold_217_curated_28
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25981..27036
DNA (1056bp) protein (352aa)
Membrane protein AbrB (Fragment) n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HP24_9RHIZ rbh
Membrane protein AbrB {ECO:0000313|EMBL:EHK57524.1}; Flags: Fragment;; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
membrane protein AbrB duplication rbh
S12_scaffold_217_curated_29
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27342..29060
DNA (1719bp) protein (573aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
2-isopropylmalate synthase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HP21_9RHIZ rbh
2-isopropylmalate synthase rbh
S12_scaffold_217_curated_30
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29057..29824
DNA (768bp) protein (256aa)
PREDICTED: monoacylglycerol lipase abhd6-A-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C15F35
Dihydrolipoamide acetyltransferase {ECO:0000313|EMBL:ESY96168.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
putative hydrolase or acyltransferase of alpha/beta superfamily
Displaying items 1-30 of 92 in total

View Taxonomy