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S12_scaffold_768_curated

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_768_curated_1
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1346)
DNA (1344bp) protein (448aa)
RNA helicase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000301D30B rbh
DEAD/DEAH box helicase domain-containing protein {ECO:0000313|EMBL:EHH06723.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
DEAD/DEAH box helicase rbh
S12_scaffold_768_curated_2
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1659..2228)
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVU1_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK55154.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
S12_scaffold_768_curated_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2422..3696)
DNA (1275bp) protein (425aa)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Threonine dehydratase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVU0_9RHIZ rbh
threonine dehydratase rbh
S12_scaffold_768_curated_4
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3779..5602)
DNA (1824bp) protein (608aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;"
UPI0003CE6F3B related cluster n=1 Tax=unknown RepID=UPI0003CE6F3B rbh
adenine deaminase rbh
S12_scaffold_768_curated_5
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5759..7942)
DNA (2184bp) protein (728aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D39806 rbh
TRAP-type transport system, fused permease {ECO:0000313|EMBL:EKF60846.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
TRAP-type transport system, fused permease rbh
S12_scaffold_768_curated_6
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8031..9008)
DNA (978bp) protein (326aa)
C4-dicarboxylate ABC transporter substrate-binding protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D85745 rbh
hypothetical protein rbh
Tax=BJP_IG2158_Rhodobacterales_64_37
S12_scaffold_768_curated_7
unknown

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9164..9361
DNA (198bp) protein (66aa)

This feature has no annotations

S12_scaffold_768_curated_trna_1
unknown

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comp(9313..9394)
DNA (82bp)
transferRNA Leu
S12_scaffold_768_curated_8
Mesorhizobium sp. LSJC264A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9459..10253)
DNA (795bp) protein (265aa)
Diguanylate cyclase n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7F601_9RHIZ
Diguanylate cyclase {ECO:0000313|EMBL:ESX26600.1}; TaxID=1287321 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC264A00.;"
diguanylate cyclase (GGDEF) domain-containing protein
S12_scaffold_768_curated_9
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10368..11540)
DNA (1173bp) protein (391aa)
UPI0003CF48B1 related cluster n=1 Tax=unknown RepID=UPI0003CF48B1
Extracellular ligand-binding receptor
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESY82303.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
S12_scaffold_768_curated_10
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11569..11943)
DNA (375bp) protein (125aa)
UPI0003CF0D3A related cluster n=1 Tax=unknown RepID=UPI0003CF0D3A
Uncharacterized protein {ECO:0000313|EMBL:ESY82305.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
hypothetical protein
S12_scaffold_768_curated_11
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12006..23435)
DNA (11430bp) protein (3810aa)
VCBS protein n=1 Tax=Pelodictyon luteolum (strain DSM 273) RepID=Q3B527_PELLD
Uncharacterized protein {ECO:0000313|EMBL:BAM89150.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
outer membrane adhesin-like protein rbh
Displaying 12 items

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