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S12_scaffold_301_curated_30

Organism: S12_Mesorhizobium_65_22_curated

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 29423..30220

Top 3 Functional Annotations

Value Algorithm Source
lipopolysaccharide biosynthesis protein n=1 Tax=Rhizobium giardinii RepID=UPI00036654FF similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 250.0
  • Bit_score: 232
  • Evalue 4.00e-58
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:KGE01049.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.4
  • Coverage: 262.0
  • Bit_score: 251
  • Evalue 9.00e-64
glycosyl transferase similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 264.0
  • Bit_score: 226
  • Evalue 6.30e-57

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGTCCAACGCCCCCATCCCCGTCTCCGTCTACATCGTCTGCAAGAACGAGCGCGCGGTTCTCGGCGCCTGCCTCGACAGCGTGGCCGGCTTTCGCGAAATCGTCATCGTCGATTCCGGTTCGACCGACGGCACGCTGGACCTCATCGCGGACTATCTTGGCCGCGGCTTTCCGATCCGGCTTTTCGAGCGCGAATGGCCGGGCTTCGCGCGCCAGAAGCAGTTCGCCCTCGACCAGTGCGACGGGCCGTGGTGCCTCAATCTGGACGCCGACGAGCGGCTCGAGCCGGAACTGGCGGAAGCGATCGGCCGAGCGGTCGCCGGCGCCGTCGACACAGCCGGCTTCTCCATGCGGATGGCGCAATACCTGCCGGGCTACGGTTATGCCCCGCCCGCCGTCCATGTGAAGCCGCAGATCCGCCTGTTCCACAAGGCGCGCGCCCGCTACCGCCTCGACCAGCTCCTGCACGAGGGCCTGACCTATGACGGGCCGGTTGCCCGCATCGCCGAGGGTCGCATCCTGCACTTCCGCAACCTGACGCTAACCCAGGACGTGTTGAAGTCGGACGCCTATGCCACCCTGAAGGCGCGCCAATACCACGCGCGCGGCCGCAAGCCGGGGCTGCTGCGCCTCGCCTTCCATCCGCTCGGCCGGTTTCTGGCGAGCTACCTGCTGCAGCGCTACTTCCTGTGCGGACGGGCCGGCTTCGTCCACGCGGCCATGCTCGGCGTCTACGTCTTCCTCGCCGAAGCCAAGCTCTACCGCCTGTCGCTCGGGGCCGACGCGCCGGAGGAGTGA
PROTEIN sequence
Length: 266
MSNAPIPVSVYIVCKNERAVLGACLDSVAGFREIVIVDSGSTDGTLDLIADYLGRGFPIRLFEREWPGFARQKQFALDQCDGPWCLNLDADERLEPELAEAIGRAVAGAVDTAGFSMRMAQYLPGYGYAPPAVHVKPQIRLFHKARARYRLDQLLHEGLTYDGPVARIAEGRILHFRNLTLTQDVLKSDAYATLKARQYHARGRKPGLLRLAFHPLGRFLASYLLQRYFLCGRAGFVHAAMLGVYVFLAEAKLYRLSLGADAPEE*