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S12_scaffold_301_curated

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_301_curated_1
unknown

Not on your lists

comp(1..348)
DNA (348bp) protein (116aa)

This feature has no annotations

S12_scaffold_301_curated_2
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

409..900
DNA (492bp) protein (164aa)
Putative pyridoxamine oxidase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YFB9_MOBAS
Putative pyridoxamine oxidase {ECO:0000313|EMBL:EAS49054.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
pyridoxamine 5'-phosphate oxidase-related protein
S12_scaffold_301_curated_3
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

979..1530
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000316E490
Methylated-DNA/protein-cysteine methyltransferase {ECO:0000313|EMBL:CDX31213.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
methylated-DNA-protein-cystein methyltransferase
S12_scaffold_301_curated_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1531..1836)
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPH2_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57375.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
S12_scaffold_301_curated_5
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2153..2365
DNA (213bp) protein (71aa)
Cold-shock DNA-binding domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPG9_9RHIZ
Cold-shock DNA-binding domain-containing protein {ECO:0000313|EMBL:EHK57372.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
cold shock protein
S12_scaffold_301_curated_6
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2700..3167
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VF81_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ12996.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter alkaliphilus HTCC2654.;"
S12_scaffold_301_curated_7
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3164..3781
DNA (618bp) protein (206aa)
Regulatory protein E n=2 Tax=Actinoplanes friuliensis RepID=A3KFH5_9ACTO
TetR family transcriptional regulator {ECO:0000313|EMBL:KFF95489.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
putative TetR-family transcriptional regulator
S12_scaffold_301_curated_8
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3824..4720
DNA (897bp) protein (299aa)
mmsb3; tartronate semialdehyde reductase (TSAR) (EC:1.1.1.60) rbh
Tartronate semialdehyde reductase (TSAR) n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AF12_RHIFH rbh
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:KJB94799.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
S12_scaffold_301_curated_9
Mesorhizobium sp. L103C119B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4725..5927)
DNA (1203bp) protein (401aa)
UPI0003D0671F related cluster n=1 Tax=unknown RepID=UPI0003D0671F rbh
LpqC, poly {ECO:0000313|EMBL:ESZ69922.1}; TaxID=1287085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C119B0.;"
esterase, phb depolymerase family rbh
S12_scaffold_301_curated_10
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6063..7145)
DNA (1083bp) protein (361aa)
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000256|HAMAP-Rule:MF_01727}; EC=3.6.3.20 {ECO:0000256|HAMAP-Rule:MF_01727};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
Glycerol-3-phosphate transporter ATP-binding subunit n=1 Tax=Nitratireductor indicus C115 RepID=K2PPH8_9RHIZ rbh
ugpC; disease resistance ABC transporter ATPase rbh
S12_scaffold_301_curated_11
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7149..7997)
DNA (849bp) protein (283aa)
glycerol-3-phosphate transporter membrane protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000319FA66 rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EHK57979.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
binding-protein-dependent transport system inner membrane protein rbh
S12_scaffold_301_curated_12
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8045..8929)
DNA (885bp) protein (295aa)
glycerol-3-phosphate transporter permease n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000304181E rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EHK57978.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
binding-protein-dependent transport system inner membrane protein rbh
S12_scaffold_301_curated_13
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9115..10428)
DNA (1314bp) protein (438aa)
Family 1 extracellular solute-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMQ8_9RHIZ rbh
Family 1 extracellular solute-binding protein {ECO:0000313|EMBL:EHK57977.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ugpB; glycerol-3-phosphate ABC transporter substrate-binding protein rbh
S12_scaffold_301_curated_14
Brucella melitensis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10586..11203)
DNA (618bp) protein (206aa)
Glutathione S-transferase (EC:2.5.1.18)
Glutathione S-transferase n=231 Tax=Brucella RepID=D0B9T9_BRUME
Glutathione S-transferase {ECO:0000313|EMBL:EEW86445.1}; TaxID=224914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094).;"
S12_scaffold_301_curated_15
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11363..12220)
DNA (858bp) protein (286aa)
EAL domain-containing protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KJM1_MESAW
EAL domain-containing protein
EAL domain-containing protein {ECO:0000313|EMBL:AGB44725.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
S12_scaffold_301_curated_16
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12357..13199)
DNA (843bp) protein (281aa)
Diguanylate phosphodiesterase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FJ30_9RHIZ rbh
Diguanylate phosphodiesterase {ECO:0000313|EMBL:ESX78819.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
EAL domain-containing protein rbh
S12_scaffold_301_curated_17
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13423..14625
DNA (1203bp) protein (401aa)
Aspartate aminotransferase {ECO:0000313|EMBL:ESZ28848.1}; EC=2.6.1.1 {ECO:0000313|EMBL:ESZ28848.1};; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
aspartate aminotransferase (EC:2.6.1.1) rbh
aspartate aminotransferase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003762193 rbh
S12_scaffold_301_curated_18
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14800..16665
DNA (1866bp) protein (622aa)
Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YFA8_MOBAS rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB81453.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
GAF sensor-containing diguanylate cyclase/phosphodiesterase rbh
S12_scaffold_301_curated_19
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16832..18154
DNA (1323bp) protein (441aa)
Dienelactone hydrolase-like protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DDR1_9RHIZ rbh
Putative dienelactone hydrolase {ECO:0000313|EMBL:KFC62085.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein rbh
S12_scaffold_301_curated_20
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18440..19243
DNA (804bp) protein (268aa)
UPI0003CFAD95 related cluster n=1 Tax=unknown RepID=UPI0003CFAD95 rbh
Ion transporter {ECO:0000313|EMBL:ESZ15018.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
Ion transport 2 domain-containing protein rbh
S12_scaffold_301_curated_21
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19252..20499)
DNA (1248bp) protein (416aa)
Sodium/hydrogen exchanger n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I1M7_9RHIZ rbh
Sodium/hydrogen exchanger {ECO:0000313|EMBL:EHK53091.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
NhaP-type Na+(K+)/H+ antiporter
S12_scaffold_301_curated_22
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20754..22802
DNA (2049bp) protein (683aa)
Elongation factor G, EF-G n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98I62_RHILO rbh
fusA; elongation factor G rbh
Elongation factor G, EF-G {ECO:0000313|EMBL:BAB49654.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
S12_scaffold_301_curated_23
Mesorhizobium sp. LSJC264A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23122..24018)
DNA (897bp) protein (299aa)
LysR family transcriptional regulator n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00035F6155 rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:ESX22456.1}; TaxID=1287321 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC264A00.;"
transcriptional regulator rbh
S12_scaffold_301_curated_24
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24081..25055)
DNA (975bp) protein (325aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
Thioredoxin reductase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YAI0_9RHIZ rbh
thioredoxin reductase rbh
S12_scaffold_301_curated_25
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25298..25771
DNA (474bp) protein (158aa)
Transcription regulator AsnC-type-like protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TJ80_MESCW
transcriptional regulator AsnC-type-like protein
Transcription regulator AsnC-type-like protein {ECO:0000313|EMBL:ADV11391.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S12_scaffold_301_curated_26
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25882..26637
DNA (756bp) protein (252aa)
Peptidyl-tRNA hydrolase n=1 Tax=uncultured bacterium RepID=K1ZYJ8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KEO54187.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica DSM 10166.;"
methyltransferase FkbM
S12_scaffold_301_curated_27
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26643..27461
DNA (819bp) protein (273aa)
Glycosyl transferase, family 2 n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FW52_9RHOB
Glycosyl transferase {ECO:0000313|EMBL:KIC49954.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria sp. ANG-S1.;"
glycosyl transferase
S12_scaffold_301_curated_28
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27489..28244)
DNA (756bp) protein (252aa)
Methyltransferase family protein n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RYE2_SYNP3
Uncharacterized protein {ECO:0000313|EMBL:CDX15259.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
methyltransferase family protein
S12_scaffold_301_curated_29
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28468..29313
DNA (846bp) protein (282aa)
Methyltransferase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EH71_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KGF67632.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
hypothetical protein
S12_scaffold_301_curated_30
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29423..30220
DNA (798bp) protein (266aa)
lipopolysaccharide biosynthesis protein n=1 Tax=Rhizobium giardinii RepID=UPI00036654FF
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:KGE01049.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
glycosyl transferase
Displaying items 1-30 of 87 in total

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