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S12_scaffold_1826_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_1826_curated_1
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(99..1739)
DNA (1641bp) protein (547aa)
Transposase IS66 n=2 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0H915_9SPHN rbh
Transposase IS66 {ECO:0000313|EMBL:EQB09522.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
transposase of ISAli10, IS66 family. ORFC rbh
S12_scaffold_1826_curated_2
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1797..2144)
DNA (348bp) protein (116aa)
transposase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDE8B
Uncharacterized protein {ECO:0000313|EMBL:EQB09454.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
transposase
S12_scaffold_1826_curated_3
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2141..2518)
DNA (378bp) protein (126aa)
UPI0003CF5F3C related cluster n=1 Tax=unknown RepID=UPI0003CF5F3C
Transposase {ECO:0000313|EMBL:EXS69494.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
Uncharacterized protein y4hN
S12_scaffold_1826_curated_4
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2608..3066
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJT1_9SPHN rbh
restriction endonuclease subunit M
Restriction endonuclease subunit M {ECO:0000313|EMBL:KKC26829.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
S12_scaffold_1826_curated_5
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3493..3990)
DNA (498bp) protein (166aa)
Transcriptional regulator, MucR family n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJT3_9SPHN rbh
MucR family transcriptional regulator
MucR family transcriptional regulator {ECO:0000313|EMBL:KKC26830.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
S12_scaffold_1826_curated_6
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4253..5299
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00035EAC18 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKC26831.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
S12_scaffold_1826_curated_7
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5397..5837
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJT6_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ58416.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
S12_scaffold_1826_curated_8
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6031..7128)
DNA (1098bp) protein (366aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJT7_9SPHN rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ58417.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
S12_scaffold_1826_curated_9
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7161..7529)
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJT8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EHJ58418.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
hypothetical protein
S12_scaffold_1826_curated_10
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7642..8649)
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJT9_9SPHN rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ58419.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
S12_scaffold_1826_curated_11
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8649..9524)
DNA (876bp) protein (292aa)
Radical SAM family protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJU0_9SPHN rbh
radical SAM protein
Radical SAM family protein {ECO:0000313|EMBL:EHJ58420.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
S12_scaffold_1826_curated_12
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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9958..10530
DNA (573bp) protein (191aa)
Nitroreductase n=1 Tax=Acetonema longum DSM 6540 RepID=F7NGY2_9FIRM
Nitroreductase {ECO:0000313|EMBL:EGO64713.1}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;"
nitroreductase
S12_scaffold_1826_curated_13
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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10564..10881
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Bacillus sp. 1NLA3E RepID=N0AV18_9BACI
Uncharacterized protein {ECO:0000313|EMBL:KEO84628.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
hypothetical protein
S12_scaffold_1826_curated_14
unknown

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comp(11390..11605)
DNA (216bp) protein (72aa)

This feature has no annotations

Displaying 14 items

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