name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
S12_scaffold_62_curated_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(159..1085)
|
Site-specific recombinase, phage integrase family protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NBN0_ERYLH
rbh
Tyrosine recombinase XerC {ECO:0000313|EMBL:AKH44025.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
site-specific recombinase, phage integrase
rbh
|
|
S12_scaffold_62_curated_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1082..2464)
|
Site-specific recombinase, phage integrase family protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NBN1_ERYLH
rbh
Site-specific tyrosine recombinase XerC {ECO:0000313|EMBL:AKH44026.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
site-specific recombinase, phage integrase
rbh
|
|
S12_scaffold_62_curated_3
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2544..3440)
|
UPI0003CF9993 related cluster n=1 Tax=unknown RepID=UPI0003CF9993
rbh
Uncharacterized protein {ECO:0000313|EMBL:ETA72474.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
hypothetical protein
rbh
|
|
S12_scaffold_62_curated_4
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3437..4774)
|
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00037DAA5E
rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB33868.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
HipA domain-containing protein
rbh
|
|
S12_scaffold_62_curated_5
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4774..5043)
|
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00031EFEA2
Uncharacterized protein {ECO:0000313|EMBL:EQB10327.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
helix-turn-helix domain-containing protein
|
|
S12_scaffold_62_curated_6
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5530..6774)
|
integrase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002EEE0B5
rbh
putative integrase
rbh
Putative integrase {ECO:0000313|EMBL:BAI95168.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
|
|
S12_scaffold_62_curated_trna_3
unknown
|
Not on your lists |
comp(6936..7019)
|
transferRNA Leu
|
|
S12_scaffold_62_curated_7
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7243..8220
|
NAD-dependent epimerase/dehydratase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3Q7_NOVAD
rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:KHS44145.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
NAD-dependent epimerase/dehydratase
rbh
|
|
S12_scaffold_62_curated_8
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8244..8915)
|
Glutathione S-transferase-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3Q8_NOVAD
rbh
Glutathione S-transferase-like protein {ECO:0000313|EMBL:KHS44357.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
glutathione S-transferase-like protein
rbh
|
|
S12_scaffold_62_curated_9
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8991..10064)
|
Putative MscS family transporter n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IHP2_9SPHN
rbh
putative MscS family transporter
rbh
Putative MscS family transporter {ECO:0000313|EMBL:BAK66815.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
S12_scaffold_62_curated_10
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10165..10971)
|
putative glycosyltransferase (EC:2.1.1.64)
Putative glycosyltransferase {ECO:0000313|EMBL:AEK60656.1}; EC=2.1.1.64 {ECO:0000313|EMBL:AEK60656.1};; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
Putative glycosyltransferase n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AI73_COLFT
|
|
S12_scaffold_62_curated_11
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11022..11273)
|
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7R0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHS44353.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hypothetical protein
|
|
S12_scaffold_62_curated_12
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11309..11752)
|
CheW protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7Q9_9SPHN
Purine-binding chemotaxis protein CheW {ECO:0000313|EMBL:KHS44352.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
chemotaxis protein CheW
|
|
S12_scaffold_62_curated_13
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11784..12155)
|
chemotaxis protein CheY n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B54FCF
Two-component system, chemotaxis family,response regulator CheY {ECO:0000313|EMBL:KHS44351.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
two-component system, chemotaxis family,response regulator CheY
|
|
S12_scaffold_62_curated_14
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12176..12733)
|
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440, ECO:0000256|SAAS:SAAS00059151};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
chemotaxis protein CheD (EC:3.5.1.44)
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7Q7_9SPHN
|
|
S12_scaffold_62_curated_15
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12736..13752)
|
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099, ECO:0000256|SAAS:SAAS00070601};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
Chemotaxis response regulator protein-glutamate methylesterase n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z7Q6_9SPHN
rbh
chemotaxis protein
|
|
S12_scaffold_62_curated_16
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13749..14618)
|
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
chemotaxis protein CheR (EC:2.1.1.80)
rbh
chemotaxis protein CheR n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B73408
rbh
|
|
S12_scaffold_62_curated_17
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14615..16864)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
CheA signal transduction histidine kinase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7Q4_9SPHN
rbh
chemotaxis protein CheA
|
|
S12_scaffold_62_curated_18
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16861..17154)
|
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B40824
Uncharacterized protein {ECO:0000313|EMBL:KHS44346.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
|
|
S12_scaffold_62_curated_19
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17436..18467
|
Protein-glutamate methylesterase {ECO:0000256|SAAS:SAAS00070601}; EC=3.1.1.61 {ECO:0000256|SAAS:SAAS00070601};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
two-component system, chemotaxis family,response regulator CheB (EC:3.1.1.61)
rbh
chemotaxis protein CheB n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B3576A
rbh
|
|
S12_scaffold_62_curated_20
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18667..19050)
|
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7Q1_9SPHN
Flagellin-specific chaperone FliS-like protein {ECO:0000313|EMBL:KHS44344.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
flagellin-specific chaperone FliS-like protein
|
|
S12_scaffold_62_curated_21
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19050..20492)
|
flagellar hook protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0CC3
rbh
Flagellar hook-associated protein 2 {ECO:0000313|EMBL:KHS44343.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
flagellar hook protein
|
|
S12_scaffold_62_curated_22
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20498..21676)
|
Flagellar biosynthetic protein FlhB n=2 Tax=Novosphingobium RepID=F6IIW0_9SPHN
rbh
Flagellar biosynthetic protein FlhB {ECO:0000313|EMBL:KHS44342.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
flagellar biosynthetic protein FlhB
rbh
|
|
S12_scaffold_62_curated_23
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21686..22468)
|
Flagellar biosynthetic protein fliR n=2 Tax=Novosphingobium RepID=F6IIV9_9SPHN
rbh
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
flagellar biosynthesis protein FliR
|
|
S12_scaffold_62_curated_24
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22481..22753)
|
Flagellar biosynthetic protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7P8_9SPHN
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:KHS44340.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
flagellar biosynthesis protein FliQ
|
|
S12_scaffold_62_curated_25
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22759..23547)
|
Flagellar biosynthesis protein FliP {ECO:0000313|EMBL:KHS44339.1}; EC=3.1.1.3 {ECO:0000313|EMBL:KHS44339.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
Flagellar biosynthesis protein FliP n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7P7_9SPHN
rbh
flagellar biosynthesis protein flip
|
|
S12_scaffold_62_curated_26
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23544..23858)
|
flagellar biogenesis protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B675F2
Flagellar biogenesis protein FliO {ECO:0000313|EMBL:KHS44338.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
flagellar biogenesis protein
|
|
S12_scaffold_62_curated_27
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23858..24166)
|
flagellar motor switch protein FliN n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B3CCFB
Flagellar motor switch protein FliN/FliY {ECO:0000313|EMBL:KHS44337.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
flagellar motor switch protein FliN
|
|
S12_scaffold_62_curated_28
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24163..25101)
|
flagellar motor switch protein FliM n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B653B1
Flagellar motor switch protein FliM {ECO:0000313|EMBL:KHS44336.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
flagellar motor switch protein FliM
|
|
S12_scaffold_62_curated_29
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25168..25761)
|
Flagellar basal body-associated protein FliL n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7P3_9SPHN
Flagellar FliL protein {ECO:0000313|EMBL:KHS44335.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
flagellar basal body-associated protein FliL
|