name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
S12_scaffold_389_curated_1
unknown
|
Not on your lists |
comp(3..62)
|
This feature has no annotations |
|
S12_scaffold_389_curated_2
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria
|
Not on your lists |
comp(43..1080)
|
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00035FC853
rbh
Acyltransferase 3 {ECO:0000313|EMBL:EDL57176.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
acyltransferase 3
|
|
S12_scaffold_389_curated_3
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1105..2160)
|
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
rbh
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3A3_NOVAD
rbh
|
|
S12_scaffold_389_curated_4
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2153..3010)
|
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
rbh
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:ABD27671.1}; EC=1.1.1.133 {ECO:0000313|EMBL:ABD27671.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
dTDP-4-dehydrorhamnose reductase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3A2_NOVAD
rbh
|
|
S12_scaffold_389_curated_5
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3007..3561)
|
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
rbh
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:ABD27672.1}; EC=5.1.3.13 {ECO:0000313|EMBL:ABD27672.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3A1_NOVAD
rbh
|
|
S12_scaffold_389_curated_6
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3558..4535)
|
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
rbh
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3A0_NOVAD
rbh
|
|
S12_scaffold_389_curated_7
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4856..6118
|
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G399_NOVAD
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD27674.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
S12_scaffold_389_curated_8
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6544..6801
|
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G392_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27681.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
S12_scaffold_389_curated_9
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6935..8293
|
O-antigen polymerase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G391_NOVAD
rbh
O-antigen polymerase
rbh
O-antigen polymerase {ECO:0000313|EMBL:ABD27682.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
S12_scaffold_389_curated_10
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8290..9012
|
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G390_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27683.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
S12_scaffold_389_curated_11
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9046..9594)
|
OstA-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G389_NOVAD
OstA-like protein
OstA-like protein {ECO:0000313|EMBL:ABD27684.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
S12_scaffold_389_curated_12
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9597..10241)
|
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G388_NOVAD
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD27685.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
S12_scaffold_389_curated_13
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10267..10884)
|
3'-5' exonuclease n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G387_NOVAD
rbh
3'-5' exonuclease {ECO:0000313|EMBL:KHS42048.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
3'-5' exonuclease
rbh
|
|
S12_scaffold_389_curated_14
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11071..11988
|
Sulfate adenylyltransferase {ECO:0000256|SAAS:SAAS00055732}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055732};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4)
rbh
sulfate adenylyltransferase subunit 2 n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5CCA9
rbh
|
|
S12_scaffold_389_curated_15
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11988..13904
|
Adenylylsulfate kinase {ECO:0000313|EMBL:ABD27688.1}; EC=2.7.1.25 {ECO:0000313|EMBL:ABD27688.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
Adenylylsulfate kinase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G385_NOVAD
rbh
|
|
S12_scaffold_389_curated_16
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13956..14228
|
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G384_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27689.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
S12_scaffold_389_curated_17
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14295..15599)
|
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
rbh
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:ABD27690.1}; EC=1.1.1.22 {ECO:0000313|EMBL:ABD27690.1};; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
UDP-glucose 6-dehydrogenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G383_NOVAD
rbh
|
|
S12_scaffold_389_curated_18
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15750..16433
|
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
uracil-DNA glycosylase (EC:3.2.2.-)
rbh
Uracil-DNA glycosylase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G382_NOVAD
rbh
|
|
S12_scaffold_389_curated_19
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16481..16897)
|
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G381_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27692.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
S12_scaffold_389_curated_20
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16894..17421)
|
signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
Lipoprotein signal peptidase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G380_NOVAD
|
|
S12_scaffold_389_curated_21
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17421..20552)
|
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
rbh
Isoleucine--tRNA ligase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L077_9SPHN
rbh
|
|
S12_scaffold_389_curated_22
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20634..21557)
|
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
FMN adenylyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G378_NOVAD
rbh
|
|
S12_scaffold_389_curated_23
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21655..22170)
|
dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
Dihydrofolate reductase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G376_NOVAD
|
|
S12_scaffold_389_curated_24
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22167..23225)
|
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21)
rbh
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
5-(Carboxyamino)imidazole ribonucleotide synthase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G375_NOVAD
rbh
|
|
S12_scaffold_389_curated_25
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23236..23733)
|
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5BE47
|
|
S12_scaffold_389_curated_26
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23761..24447)
|
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
gpmA; phosphoglyceromutase (EC:5.4.2.1)
rbh
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=GPMA_NOVAD
rbh
|
|
S12_scaffold_389_curated_27
unknown
|
Not on your lists |
comp(24491..24691)
|
hypothetical protein
|
|
S12_scaffold_389_curated_trna_1
unknown
|
Not on your lists |
24827..24898
|
transferRNA Thr
|
|
S12_scaffold_389_curated_28
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25031..25408
|
Uncharacterized protein {ECO:0000313|EMBL:EZP65302.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
Putative uncharacterized protein id=15192440 bin=GWC2_NOV_55_46 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
|
|
S12_scaffold_389_curated_29
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25405..25704)
|
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G372_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27701.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|