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S12_scaffold_160_curated

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_160_curated_1
unknown

Not on your lists

comp(2..82)
DNA (81bp) protein (27aa)

This feature has no annotations

S12_scaffold_160_curated_2
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(277..1023)
DNA (747bp) protein (249aa)
Short-chain dehydrogenase/reductase SDR (EC:1.1.1.100)
short-chain dehydrogenase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248B8D8 rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:EXS70952.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
S12_scaffold_160_curated_3
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1020..1874)
DNA (855bp) protein (285aa)
alpha/beta hydrolase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248B8D9 rbh
alpha/beta hydrolase fold protein
Tax=GWF1_Sphingomonadales_63_6_curated
S12_scaffold_160_curated_4
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1891..2445)
DNA (555bp) protein (185aa)
methylmalonyl-CoA epimerase n=1 Tax=Sphingobium xenophagum RepID=UPI0003670325 rbh
Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
S12_scaffold_160_curated_5
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2458..2871)
DNA (414bp) protein (138aa)
dehydratase n=1 Tax=Sphingobium xenophagum RepID=UPI0003677CE3
MaoC-like dehydratase {ECO:0000313|EMBL:EAT10479.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
hypothetical protein
S12_scaffold_160_curated_6
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2868..3326)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248B8DC
Uncharacterized protein {ECO:0000313|EMBL:AJR25399.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
S12_scaffold_160_curated_7
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3326..4489)
DNA (1164bp) protein (388aa)
Putative acyl-CoA dehydrogenase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NHA4_9SPHN rbh
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:EAT10477.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
acyl-CoA dehydrogenase domain-containing protein
S12_scaffold_160_curated_8
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4687..5910)
DNA (1224bp) protein (408aa)
cytochrome P450 n=1 Tax=Sphingobium xenophagum RepID=UPI000361D38C rbh
Cytochrome P450 {ECO:0000313|EMBL:AJR25376.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
cytochrome P450 rbh
S12_scaffold_160_curated_9
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5993..7030)
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00031826FF rbh
Uncharacterized protein {ECO:0000313|EMBL:AJR25350.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
hypothetical protein
S12_scaffold_160_curated_10
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7060..7485)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NH58_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EXS70980.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
hypothetical protein
S12_scaffold_160_curated_11
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7523..8311)
DNA (789bp) protein (263aa)
6-phosphogluconate dehydrogenase NAD-binding protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IXP5_FRASU
6-phosphogluconate dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ADP80204.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
dehydrogenase/reductase
S12_scaffold_160_curated_12
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8423..8962)
DNA (540bp) protein (180aa)
methylmalonyl-CoA mutase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248AB49
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:AJR25440.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
glyoxalase/bleomycin resistance protein/dioxygenase
S12_scaffold_160_curated_13
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8998..10263)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002FD975B rbh
Uncharacterized protein {ECO:0000313|EMBL:AJR25439.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
hypothetical protein
S12_scaffold_160_curated_14
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10260..11036)
DNA (777bp) protein (259aa)
Putative short chain dehydrogenase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NHE9_9SPHN rbh
Putative short chain dehydrogenase {ECO:0000313|EMBL:EAT10432.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
short-chain dehydrogenase
S12_scaffold_160_curated_15
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11042..12250)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00030C36F4 rbh
Uncharacterized protein {ECO:0000313|EMBL:AJR25437.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
hypothetical protein
S12_scaffold_160_curated_16
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12395..13474)
DNA (1080bp) protein (360aa)
coenzyme F420-dependent N(5), N(10)-methylenetetrahydromethanopterin reductase (EC:1.5.99.11) rbh
Uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NHE6_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL44695.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
S12_scaffold_160_curated_17
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13606..14004)
DNA (399bp) protein (133aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS09065.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
S12_scaffold_160_curated_18
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14168..15826
DNA (1659bp) protein (553aa)
fumarate reductase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A792 rbh
Fumarate reductase {ECO:0000313|EMBL:AJR25425.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
putative 3-oxosteroid 1-dehydrogenase rbh
S12_scaffold_160_curated_19
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15841..16848
DNA (1008bp) protein (336aa)
Alcohol dehydrogenase, zinc-containing n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NH93_9SPHN rbh
Alcohol dehydrogenase, zinc-containing {ECO:0000313|EMBL:EAT10488.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
hypothetical protein rbh
S12_scaffold_160_curated_20
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16845..17645)
DNA (801bp) protein (267aa)
short-chain dehydrogenase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248AB3C rbh
short-chain dehydrogenase/reductase SDR rbh
Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
S12_scaffold_160_curated_21
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17702..18583)
DNA (882bp) protein (294aa)
AraC family transcriptional regulator n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248AB39
AraC family transcriptional regulator {ECO:0000313|EMBL:AJR25445.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
AraC family transcriptional regulator
S12_scaffold_160_curated_22
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18622..19029)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248AB38
Uncharacterized protein {ECO:0000313|EMBL:EXS70911.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
hypothetical protein
S12_scaffold_160_curated_23
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19059..19499)
DNA (441bp) protein (147aa)
putative terpene synthesis protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A791
Uncharacterized protein {ECO:0000313|EMBL:KJS08497.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
terpene synthesis protein
S12_scaffold_160_curated_24
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19801..20952
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NH68_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EAT10513.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
hypothetical protein rbh
S12_scaffold_160_curated_25
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21121..21645)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00031F9B70 rbh
Uncharacterized protein {ECO:0000313|EMBL:AJR25393.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
S12_scaffold_160_curated_26
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21830..22288
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002DFE348
Uncharacterized protein {ECO:0000313|EMBL:KFL47538.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
hypothetical protein
S12_scaffold_160_curated_27
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22410..24758
DNA (2349bp) protein (783aa)
glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase (EC:1.1.5.8) rbh
glucose dehydrogenase n=1 Tax=Sphingobium xenophagum RepID=UPI0003051F5E rbh
Quinoprotein glucose dehydrogenase {ECO:0000313|EMBL:KFL47537.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
S12_scaffold_160_curated_28
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24825..25754)
DNA (930bp) protein (310aa)
glconolactonase n=1 Tax=Sphingobium xenophagum RepID=UPI00035FA9C7 rbh
Gluconolactonase, putative {ECO:0000313|EMBL:EAT10544.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
SMP-30/gluconolaconase/LRE domain-containing protein rbh
S12_scaffold_160_curated_29
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25910..26674
DNA (765bp) protein (255aa)
protein tyrosine/serine phosphatase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A79E
Protein tyrosine phosphatase {ECO:0000313|EMBL:EXS70918.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
protein tyrosine/serine phosphatase
S12_scaffold_160_curated_30
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26733..27836)
DNA (1104bp) protein (368aa)
Alpha-methylacyl-CoA racemase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MN80_9SPHN rbh
L-carnitine dehydratase/bile acid-inducible protein F rbh
Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
Displaying items 1-30 of 96 in total

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