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S12_scaffold_458_curated

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Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_458_curated_1
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86..3379)
DNA (3294bp) protein (1098aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5Q5_NOVAD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD26818.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
S12_scaffold_458_curated_2
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3379..5265)
DNA (1887bp) protein (629aa)
Hemolysin activation/secretion protein-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5Q4_NOVAD rbh
hemolysin activation/secretion protein-like protein rbh
Hemolysin activation/secretion protein-like protein {ECO:0000313|EMBL:ABD26819.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
S12_scaffold_458_curated_3
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5380..6150)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5Q3_NOVAD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD26820.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
S12_scaffold_458_curated_4
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6192..6962)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5Q2_NOVAD rbh
Uncharacterized protein {ECO:0000313|EMBL:KHS45534.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hypothetical protein rbh
S12_scaffold_458_curated_5
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6949..8994)
DNA (2046bp) protein (682aa)
Adenylate/guanylate cyclase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5Q1_NOVAD rbh
Adenylate/guanylate cyclase {ECO:0000313|EMBL:ABD26822.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
guanylate cyclase rbh
S12_scaffold_458_curated_6
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8998..12147)
DNA (3150bp) protein (1050aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5Q0_NOVAD rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD26823.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
hypothetical protein rbh
S12_scaffold_458_curated_7
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12313..12984)
DNA (672bp) protein (224aa)
Nitroreductase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IQ52_9SPHN rbh
Nitroreductase {ECO:0000313|EMBL:KHS45538.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
nitroreductase rbh
S12_scaffold_458_curated_8
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13030..14844)
DNA (1815bp) protein (605aa)
Cobaltochelatase CobT subunit {ECO:0000313|EMBL:ABD26825.1}; EC=6.6.1.2 {ECO:0000313|EMBL:ABD26825.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
cobalt chelatase, pCobT subunit (EC:6.6.1.2) rbh
Cobaltochelatase CobT subunit n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5P8_NOVAD rbh
S12_scaffold_458_curated_9
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14952..15605)
DNA (654bp) protein (218aa)
translaldolase (EC:2.2.1.2) rbh
Probable transaldolase {ECO:0000255|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000255|HAMAP-Rule:MF_00494};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
Probable transaldolase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=TAL_NOVAD rbh
S12_scaffold_458_curated_10
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15715..16398)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5P6_NOVAD rbh
Uncharacterized protein {ECO:0000313|EMBL:KHS45541.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hypothetical protein rbh
S12_scaffold_458_curated_11
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16469..18634
DNA (2166bp) protein (722aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
Primosomal protein N n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5P4_NOVAD rbh
primosome assembly protein PriA rbh
S12_scaffold_458_curated_12
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18682..20247
DNA (1566bp) protein (522aa)
Deoxyribodipyrimidine photolyase-related protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5P3_NOVAD rbh
deoxyribodipyrimidine photolyase-like protein rbh
Deoxyribodipyrimidine photolyase-related protein {ECO:0000313|EMBL:ABD26830.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
S12_scaffold_458_curated_13
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20254..21315)
DNA (1062bp) protein (354aa)
transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase (EC:2.1.1.63) rbh
DNA-O6-methylguanine--protein-cysteine S-methyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5P1_NOVAD rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO55372.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
S12_scaffold_458_curated_14
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21396..22973
DNA (1578bp) protein (526aa)
Peptidase S1 and S6, chymotrypsin/Hap n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5N9_NOVAD rbh
peptidase S1 and S6, chymotrypsin/Hap rbh
Peptidase S1 and S6, chymotrypsin/Hap {ECO:0000313|EMBL:ABD26834.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
S12_scaffold_458_curated_15
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23133..23687
DNA (555bp) protein (185aa)
ATP synthase subunit delta n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=ATPD_NOVAD
ATP synthase subunit delta {ECO:0000255|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000255|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000255|HAMAP-Rule:MF_01416}; Short=F-ATPase subunit delta {ECO:0000255|HAMAP-Rule:MF_01416};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
ATP synthase F0F1 subunit delta
S12_scaffold_458_curated_16
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23716..25245
DNA (1530bp) protein (510aa)
ATP synthase F0F1 subunit alpha (EC:3.6.3.14) rbh
ATP synthase subunit alpha {ECO:0000255|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000255|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000255|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000255|HAMAP-Rule:MF_01346}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
ATP synthase subunit alpha n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=ATPA_NOVAD rbh
S12_scaffold_458_curated_17
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25305..26177
DNA (873bp) protein (291aa)
ATP synthase F0F1 subunit gamma (EC:3.6.3.14) rbh
ATP synthase gamma chain n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=ATPG_NOVAD rbh
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
S12_scaffold_458_curated_18
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26207..27652
DNA (1446bp) protein (482aa)
ATP synthase F0F1 subunit beta (EC:3.6.3.14) rbh
ATP synthase subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000255|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
ATP synthase subunit beta n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=ATPB_NOVAD rbh
S12_scaffold_458_curated_19
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27727..27981
DNA (255bp) protein (85aa)
ATP synthase epsilon chain n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=ATPE_NOVAD
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
atpC; ATP synthase F0F1 subunit epsilon
S12_scaffold_458_curated_20
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28160..28834
DNA (675bp) protein (225aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5K0_NOVAD rbh
two component transcriptional regulator rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABD26873.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
S12_scaffold_458_curated_21
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28987..31656)
DNA (2670bp) protein (890aa)
TonB-dependent receptor n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5J9_NOVAD rbh
TonB-dependent receptor {ECO:0000313|EMBL:KHS45567.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
TonB-dependent receptor rbh
S12_scaffold_458_curated_22
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31769..33340)
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5J8_NOVAD rbh
Uncharacterized protein {ECO:0000313|EMBL:KHS45568.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hypothetical protein rbh
S12_scaffold_458_curated_23
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33604..33978
DNA (375bp) protein (125aa)
TPR repeat protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5J7_NOVAD
TPR repeat-containing protein
TPR repeat protein {ECO:0000313|EMBL:ABD26876.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
S12_scaffold_458_curated_24
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34318..34626
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4J3B4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGK99879.1}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobacter.;" source="Thalassobacter sp. 16PALIMAR09.;"
S12_scaffold_458_curated_25
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34616..35161
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JCN5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGK99889.1}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobacter.;" source="Thalassobacter sp. 16PALIMAR09.;"
acetyltransferase
S12_scaffold_458_curated_26
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35214..35531)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HID0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA99134.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
S12_scaffold_458_curated_27
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35755..36762)
DNA (1008bp) protein (336aa)
NADPH:quinone oxidoreductase n=1 Tax=Aureimonas ureilytica RepID=UPI000381AB8D rbh
NADPH:quinone oxidoreductase
NADPH:quinone oxidoreductase {ECO:0000313|EMBL:AIT07756.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
S12_scaffold_458_curated_28
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36811..37698)
DNA (888bp) protein (296aa)
glyoxalase n=1 Tax=Sphingomonas wittichii RepID=UPI0002E64C21
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABQ69396.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
S12_scaffold_458_curated_29
Pseudomonas sp. GM102, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37771..39027)
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00038096C4 rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EJM03021.1}; TaxID=1144321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM102.;"
acyl-CoA dehydrogenase
S12_scaffold_458_curated_30
Endozoicomonas numazuensis, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39099..39647)
DNA (549bp) protein (183aa)
Flavin reductase domain protein FMN-binding n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B6A515_RHILW
Uncharacterized protein {ECO:0000313|EMBL:KEQ19625.1}; TaxID=1137799 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas numazuensis.;"
flavin reductase domain protein FMN-binding
Displaying items 1-30 of 32 in total

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