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S12_scaffold_114_curated

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Displaying items 1-30 of 141 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_114_curated_1
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4..339)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GEM3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA99121.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
Phage protein, HK97, gp10
S12_scaffold_114_curated_2
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(336..683)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0G5Z3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA99120.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
Phage head-tail adaptor
S12_scaffold_114_curated_3
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(674..1216)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HIB6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA99119.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
S12_scaffold_114_curated_4
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1216..1446)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HNH3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA99118.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
S12_scaffold_114_curated_5
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1497..2762)
DNA (1266bp) protein (422aa)
Capsid protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GFU4_9SPHN rbh
Capsid protein {ECO:0000313|EMBL:EQA98917.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
Phage major capsid protein, HK97 rbh
S12_scaffold_114_curated_6
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2787..3446)
DNA (660bp) protein (220aa)
Primosome assembly protein PriA n=1 Tax=Sphingobium baderi LL03 RepID=T0GE18_9SPHN rbh
Primosome assembly protein PriA {ECO:0000313|EMBL:EQA98916.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
gp4
S12_scaffold_114_curated_7
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3443..4690)
DNA (1248bp) protein (416aa)
Histone H1 n=1 Tax=Sphingobium baderi LL03 RepID=T0G5F2_9SPHN rbh
Histone H1 {ECO:0000313|EMBL:EQA98915.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
Phage portal protein, HK97 rbh
S12_scaffold_114_curated_8
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4687..6414)
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GGC8_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA99117.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
terminase rbh
S12_scaffold_114_curated_9
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6440..6922)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GEL8_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA99116.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
P27 family phage terminase small subunit
S12_scaffold_114_curated_10
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7370..8659)
DNA (1290bp) protein (430aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0G5Y9_9SPHN rbh
hypothetical protein rbh
S12_scaffold_114_curated_trna_1
unknown

Not on your lists

8751..8824
DNA (74bp)
transferRNA Met
S12_scaffold_114_curated_11
unknown

Not on your lists

comp(8829..9053)
DNA (225bp) protein (75aa)

This feature has no annotations

S12_scaffold_114_curated_12
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9050..9412)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HIB0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA99114.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
S12_scaffold_114_curated_13
Agrobacterium sp. H13-3, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9575..10294)
DNA (720bp) protein (240aa)
HNH endonuclease domain-containing protein n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0L4J9_AGRSH
HNH endonuclease domain-containing protein
HNH endonuclease domain-containing protein {ECO:0000313|EMBL:ADY64450.1}; TaxID=861208 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. (strain H13-3) (Rhizobium lupini (strain H13-3)).;"
S12_scaffold_114_curated_14
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10769..11368)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HNG7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA99113.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
S12_scaffold_114_curated_15
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11352..11621)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GGC4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA99112.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
Gp56
S12_scaffold_114_curated_16
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11618..12157)
DNA (540bp) protein (180aa)
Putative Polynucleotidyl transferase (Phage related) n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J6J3_POLGS
polynucleotidyl transferase
Putative Polynucleotidyl transferase (Phage related) {ECO:0000313|EMBL:ADZ72476.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
S12_scaffold_114_curated_17
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12560..14887)
DNA (2328bp) protein (776aa)
Primase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TYR4_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ18764.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
hypothetical protein rbh
S12_scaffold_114_curated_18
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14887..15087)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9R726_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KGJ08082.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
hypothetical protein
S12_scaffold_114_curated_19
Rubellimicrobium thermophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15084..16829)
DNA (1746bp) protein (582aa)
DNA or RNA helicase of superfamily II n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9R205_9RHOB rbh
DNA or RNA helicase of superfamily II {ECO:0000313|EMBL:EPX87681.1}; TaxID=1123069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium thermophilum DSM 16684.;"
superfamily II DNA/RNA helicase
S12_scaffold_114_curated_20
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16822..17766)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9SC43_9RHOB rbh
Oxidoreductase {ECO:0000313|EMBL:KGJ08081.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
hypothetical protein
S12_scaffold_114_curated_21
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17766..18128)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9SMP8_9RHOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE46604.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
S12_scaffold_114_curated_22
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18185..18673)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9R6S8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KGJ08079.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
hypothetical protein
S12_scaffold_114_curated_23
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18689..19441)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U0M2_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDP62042.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
S12_scaffold_114_curated_24
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19441..19749)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. MED193 RepID=A3X5T3_9RHOB
Wenxma_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ69523.1}; TaxID=1123501 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wenxinia marina DSM 24838.;"
hypothetical protein
S12_scaffold_114_curated_25
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19730..20452)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. MED193 RepID=A3X5T2_9RHOB
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:KGL00070.1}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobacter.;" source="Thalassobacter sp. 16PALIMAR09.;"
ECF subfamily RNA polymerase sigma-24 factor
S12_scaffold_114_curated_26
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20556..20867)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9QXC5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KGL00071.1}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobacter.;" source="Thalassobacter sp. 16PALIMAR09.;"
S12_scaffold_114_curated_27
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20974..21492)
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) RepID=E0TDM8_PARBH
hypothetical protein
Tax=BJP_08E140C01_Roseovarius_63_250
S12_scaffold_114_curated_28
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22032..22493
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0G5X3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA99100.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
S12_scaffold_114_curated_29
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22490..23809
DNA (1320bp) protein (440aa)
Resolvase n=1 Tax=Sphingobium baderi LL03 RepID=T0HMZ3_9SPHN rbh
Resolvase {ECO:0000313|EMBL:EQA98913.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
gin; Gin (G segment invertase), phage site-specific recombinase, resolvase rbh
Displaying items 1-30 of 141 in total

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