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S12_scaffold_228_curated

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Displaying items 1-30 of 81 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_228_curated_1
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

225..623
DNA (399bp) protein (133aa)
kduD-2; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase 2 (EC:1.1.1.127)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000363A628
Uncharacterized protein {ECO:0000313|EMBL:KHK89811.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
S12_scaffold_228_curated_2
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(683..1465)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248BBC5
Uncharacterized protein {ECO:0000313|EMBL:AJR25359.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
hypothetical protein
S12_scaffold_228_curated_3
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1507..2337)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002F136AC rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:AJR25358.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
short-chain dehydrogenase/reductase SDR
S12_scaffold_228_curated_4
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2483..3205)
DNA (723bp) protein (241aa)
short-chain dehydrogenase n=1 Tax=Streptomyces sp. SS RepID=UPI0002EFAB1E
3-alpha-hydroxysteroid dehydrogenase
3-alpha-hydroxysteroid dehydrogenase {ECO:0000313|EMBL:AJF68911.1}; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
S12_scaffold_228_curated_5
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3246..4055)
DNA (810bp) protein (270aa)
3-oxoacyl-(Acyl carrier protein) reductase, putative n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0C4T5_ACAM1
3-oxoacyl-ACP reductase
3-oxoacyl-(Acyl carrier protein) reductase, putative {ECO:0000313|EMBL:ABW31073.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 11017).;"
S12_scaffold_228_curated_6
Burkholderia lata, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4213..5490)
DNA (1278bp) protein (426aa)
dioxygenase (EC:1.14.12.12)
Putative dioxygenase {ECO:0000313|EMBL:ABB05811.1}; EC=1.14.12.12 {ECO:0000313|EMBL:ABB05811.1};; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194; / 383).;"
Putative dioxygenase n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39P05_BURS3
S12_scaffold_228_curated_7
unknown

Not on your lists

comp(5651..6052)
DNA (402bp) protein (134aa)

This feature has no annotations

S12_scaffold_228_curated_8
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6204..6602
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F1N5_SPHCR
Uncharacterized protein {ECO:0000313|EMBL:KEQ53552.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
hypothetical protein
S12_scaffold_228_curated_9
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6714..9371)
DNA (2658bp) protein (886aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HHA1_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA96928.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
TonB-dependent receptor rbh
S12_scaffold_228_curated_10
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9688..10491
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AVS8_PSERE
Uncharacterized protein {ECO:0000313|EMBL:KJS04322.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
S12_scaffold_228_curated_11
unknown

Not on your lists

comp(10510..10905)
DNA (396bp) protein (132aa)

This feature has no annotations

S12_scaffold_228_curated_12
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10902..11735)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI0003616BD1
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABZ71068.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
S12_scaffold_228_curated_13
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11746..12597)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Streptomyces canus RepID=UPI0003731B75
Uncharacterized protein {ECO:0000313|EMBL:KJS08248.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
short-chain dehydrogenase/reductase SDR
S12_scaffold_228_curated_14
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12594..13166)
DNA (573bp) protein (191aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS07111.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
S12_scaffold_228_curated_15
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13282..13782)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RHL1_FRAAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ63015.1}; TaxID=326424 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
S12_scaffold_228_curated_16
unknown

Not on your lists

comp(13909..14325)
DNA (417bp) protein (139aa)

This feature has no annotations

S12_scaffold_228_curated_17
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14374..15219)
DNA (846bp) protein (282aa)
short-chain dehydrogenase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002628603
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AGL19298.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
S12_scaffold_228_curated_18
Pseudomonas sp. TKP, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15503..16270
DNA (768bp) protein (256aa)
UPI0003D5F8CE related cluster n=1 Tax=unknown RepID=UPI0003D5F8CE rbh
3-oxoacyl-ACP reductase
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:AHC36202.1}; TaxID=1415630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. TKP.;"
S12_scaffold_228_curated_19
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16297..17880
DNA (1584bp) protein (528aa)
phytoene dehydrogenase n=1 Tax=Azoarcus toluclasticus RepID=UPI0003793E4F rbh
Phytoene dehydrogenase {ECO:0000313|EMBL:KGB83325.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;"
phytoene dehydrogenase rbh
S12_scaffold_228_curated_20
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18027..18866
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0G989_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA96617.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
S12_scaffold_228_curated_21
Deinococcus swuensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(18886..20073)
DNA (1188bp) protein (396aa)
Predicted protein n=1 Tax=Streptomyces sp. AA4 RepID=D9V054_9ACTO
MFS transporter
MFS transporter {ECO:0000313|EMBL:AIZ45765.1}; TaxID=1182571 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus swuensis.;"
S12_scaffold_228_curated_22
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20393..21547
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI0002F1AD86 rbh
Putative oxidoreductase {ECO:0000313|EMBL:KFL47533.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
NADH oxidase rbh
S12_scaffold_228_curated_23
Mycobacterium rufum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21623..22090)
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium tusciae JS617 RepID=H1JV47_9MYCO
Polyketide cyclase {ECO:0000313|EMBL:KGI67706.1}; TaxID=318424 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rufum.;"
bile-acid 7-alpha dehydratase
S12_scaffold_228_curated_24
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22106..23266)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NH66_9SPHN rbh
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
S12_scaffold_228_curated_25
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23290..23670)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248AB38
Uncharacterized protein {ECO:0000313|EMBL:KJS05506.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
S12_scaffold_228_curated_26
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24206..26725
DNA (2520bp) protein (840aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000377DE8E
TonB-dependent receptor {ECO:0000313|EMBL:EAT10541.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
TonB-dependent receptor rbh
S12_scaffold_228_curated_27
unknown

Not on your lists

comp(27035..28015)
DNA (981bp) protein (327aa)

This feature has no annotations

S12_scaffold_228_curated_28
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28050..28859)
DNA (810bp) protein (270aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
Putative 3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RKF2_FRAAA
Uncharacterized protein {ECO:0000313|EMBL:KJS04322.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
S12_scaffold_228_curated_29
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28953..30401)
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NH39_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS05282.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
putative aminoglycoside phosphotransferase
S12_scaffold_228_curated_30
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30646..31470
DNA (825bp) protein (275aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS04062.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
Displaying items 1-30 of 81 in total

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