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S12_scaffold_645_curated

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_645_curated_1
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

203..691
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AV70_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:KHS49527.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hypothetical protein
S12_scaffold_645_curated_2
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1180..1668
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AV70_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:KHS49527.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hypothetical protein
S12_scaffold_645_curated_3
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2184..4127
DNA (1944bp) protein (648aa)
TonB-denpendent receptor n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GXG0_9SPHN rbh
TonB-dependent receptor {ECO:0000313|EMBL:KHS49306.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
TonB-dependent receptor
S12_scaffold_645_curated_4
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4127..5032
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GND4_9SPHN rbh
ABC transporter periplasmic protein {ECO:0000313|EMBL:KHS49307.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
periplasmic binding protein
S12_scaffold_645_curated_5
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5029..6015
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0I120_9SPHN rbh
ABC transporter {ECO:0000313|EMBL:KHS49530.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
fecCD transport family protein
S12_scaffold_645_curated_6
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6012..6794
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0I6V0_9SPHN rbh
ABC transporter-like protein {ECO:0000313|EMBL:KHS49309.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
ABC transporter
S12_scaffold_645_curated_7
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6791..7771
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036CB231 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHS49310.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hypothetical protein
S12_scaffold_645_curated_8
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8273..9310
DNA (1038bp) protein (346aa)
Cobalamin biosynthesis protein CobW n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y8U0_9SPHN rbh
Cobalamin biosynthesis protein CobW {ECO:0000313|EMBL:KHS49311.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
cobalamin biosynthesis CobW rbh
S12_scaffold_645_curated_9
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9319..12597
DNA (3279bp) protein (1093aa)
Cobaltochelatase subunit CobN {ECO:0000313|EMBL:KHS49534.1}; EC=6.6.1.2 {ECO:0000313|EMBL:KHS49534.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
cobN; cobaltochelatase subunit CobN (EC:6.6.1.2) rbh
Cobaltochelatase CobN subunit n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBI3_NOVAD rbh
S12_scaffold_645_curated_10
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12594..13721
DNA (1128bp) protein (376aa)
Precorrin-3B synthase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBI4_NOVAD rbh
Precorrin-3B synthase {ECO:0000313|EMBL:KHS49535.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
precorrin-3B synthase rbh
S12_scaffold_645_curated_11
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13721..14350
DNA (630bp) protein (210aa)
Precorrin-8X methylmutase {ECO:0000313|EMBL:KHS49536.1}; EC=5.4.99.61 {ECO:0000313|EMBL:KHS49536.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
cobH; precorrin-8X methylmutase (EC:5.4.1.2) rbh
Precorrin-8X methylmutase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBI5_NOVAD rbh
S12_scaffold_645_curated_12
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14347..15084
DNA (738bp) protein (246aa)
Precorrin-2 C20-methyltransferase {ECO:0000313|EMBL:KHS49537.1}; EC=2.1.1.130 {ECO:0000313|EMBL:KHS49537.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
precorrin-2 C20-methyltransferase (EC:2.1.1.130) rbh
Cobalt-precorrin-2 C20-methyltransferase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MNI8_9SPHN rbh
S12_scaffold_645_curated_13
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15081..15857
DNA (777bp) protein (259aa)
Precorrin-3 methyltransferase {ECO:0000313|EMBL:KHS49316.1}; EC=2.1.1.131 {ECO:0000313|EMBL:KHS49316.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
precorrin-3 methyltransferase (EC:2.1.1.131) rbh
Precorrin-3B C(17)-methyltransferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y8T6_9SPHN rbh
S12_scaffold_645_curated_14
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15854..16588
DNA (735bp) protein (245aa)
Uncharacterized protein {ECO:0000313|EMBL:KHS49539.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
S12_scaffold_645_curated_15
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16581..17789
DNA (1209bp) protein (403aa)
Precorrin-6Y C5,15-methyltransferase {ECO:0000313|EMBL:KHS49540.1}; EC=2.1.1.132 {ECO:0000313|EMBL:KHS49540.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
precorrin-6Y C5,15-methyltransferase (EC:2.1.1.132) rbh
Cobalt-precorrin-6y C5-methyltransferase / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MMV8_9SPHN rbh
S12_scaffold_645_curated_16
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17786..18151
DNA (366bp) protein (122aa)
Precorrin methylase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBJ0_NOVAD
Precorrin methylase {ECO:0000313|EMBL:KHS49319.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
precorrin methylase
S12_scaffold_645_curated_17
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18148..18933
DNA (786bp) protein (262aa)
Precorrin-4 C11-methyltransferase {ECO:0000313|EMBL:KHS49542.1}; EC=2.1.1.133 {ECO:0000313|EMBL:KHS49542.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
precorrin-4 C11-methyltransferase (EC:2.1.1.133) rbh
Precorrin-4 C11-methyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBJ1_NOVAD rbh
S12_scaffold_645_curated_18
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18930..20243
DNA (1314bp) protein (438aa)
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:KHS49321.1}; EC=6.3.5.- {ECO:0000313|EMBL:KHS49321.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
cobyrinic acid a,c-diamide synthase (EC:6.3.5.- 6.3.5.9) rbh
Cobyrinic acid A,C-diamide synthase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBJ2_NOVAD rbh
S12_scaffold_645_curated_19
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20240..20962
DNA (723bp) protein (241aa)
Uroporphyrin-III C-methyltransferase n=1 Tax=Sphingomonas sp. S17 RepID=F3X2F2_9SPHN rbh
Uroporphyrin-III methyltransferase {ECO:0000313|EMBL:EXS69037.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
uroporphyrin-III methyltransferase
S12_scaffold_645_curated_20
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20959..21723
DNA (765bp) protein (255aa)
Precorrin 6A synthase {ECO:0000313|EMBL:KHS49323.1}; EC=2.1.1.152 {ECO:0000313|EMBL:KHS49323.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
precorrin 6A synthase (EC:2.1.1.152) rbh
Precorrin-6A synthase (Deacetylating) n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBJ3_NOVAD rbh
S12_scaffold_645_curated_21
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21713..22339
DNA (627bp) protein (209aa)
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:KHS49324.1}; EC=2.5.1.17 {ECO:0000313|EMBL:KHS49324.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17) rbh
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZWB2_9SPHN rbh
S12_scaffold_645_curated_22
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22450..22983
DNA (534bp) protein (178aa)
Cob(II)yrinic acid a,c-diamide reductase {ECO:0000313|EMBL:KHS49325.1}; EC=1.16.8.1 {ECO:0000313|EMBL:KHS49325.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
Cob(II)yrinic acid a,c-diamide reductase (EC:1.16.8.1)
Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MM57_9SPHN
S12_scaffold_645_curated_23
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23009..23416
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MNI1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHS49548.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hypothetical protein
S12_scaffold_645_curated_24
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23413..24429
DNA (1017bp) protein (339aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21) rbh
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDB2F rbh
S12_scaffold_645_curated_25
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24426..24995
DNA (570bp) protein (190aa)
Phosphoglycerate/bisphosphoglycerate mutase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z393_9SPHN
Phosphoglycerate/bisphosphoglycerate mutase {ECO:0000313|EMBL:KHS49328.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
phosphoglycerate/bisphosphoglycerate mutase
S12_scaffold_645_curated_26
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25009..25725
DNA (717bp) protein (239aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Adenosylcobinamide-GDP ribazoletransferase; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
cobS2; Cobalamin synthase (EC:2.-.-.-)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00035C0BE0 rbh
S12_scaffold_645_curated_27
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25722..26711
DNA (990bp) protein (330aa)
Aminotransferase {ECO:0000313|EMBL:KHS49330.1}; EC=2.6.1.- {ECO:0000313|EMBL:KHS49330.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
aminotransferase (EC:2.6.1.-) rbh
aminotransferase n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000375BE46 rbh
S12_scaffold_645_curated_28
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26680..27657
DNA (978bp) protein (326aa)
adenosylcobinamide-phosphate synthase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489348 rbh
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
cobD; Cobalamin biosynthesis protein CobD
S12_scaffold_645_curated_29
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27645..29108
DNA (1464bp) protein (488aa)
cobyric acid synthase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4BBBD rbh
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
cobyric acid synthase rbh
S12_scaffold_645_curated_30
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29101..29607
DNA (507bp) protein (169aa)
Adenosylcobinamide kinase {ECO:0000313|EMBL:KHS49333.1}; EC=2.7.1.156 {ECO:0000313|EMBL:KHS49333.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
Adenosylcobinamide kinase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z398_9SPHN
cobalbumin biosynthesis enzyme
Displaying items 1-30 of 31 in total

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