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S12_scaffold_283_curated

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_283_curated_1
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

679..1869
DNA (1191bp) protein (397aa)
Transferase hexapeptide repeat protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5A6_NOVAD
Hexapeptide repeat-containing transferase {ECO:0000313|EMBL:KHS41767.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hexapaptide repeat-containing transferase
S12_scaffold_283_curated_2
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2059..3447
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3B0_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KEO88624.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;"
hypothetical protein
S12_scaffold_283_curated_3
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

3447..4349
DNA (903bp) protein (301aa)
Amino acid adenylation domain protein n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VBN7_9CYAN
amino acid adenylation domain protein
Amino acid adenylation domain protein {ECO:0000313|EMBL:AFZ04852.1}; TaxID=179408 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis PCC 7112.;"
S12_scaffold_283_curated_4
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4353..5852
DNA (1500bp) protein (500aa)
Polysaccharide biosynthesis protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3A5_NOVAD rbh
polysaccharide biosynthesis protein rbh
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
S12_scaffold_283_curated_5
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5876..7063
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00037AF82C
Uncharacterized protein {ECO:0000313|EMBL:KEO88626.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;"
glycosyl transferase group 1
S12_scaffold_283_curated_6
Jannaschia sp. CCS1, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7176..7880
DNA (705bp) protein (235aa)
Methyltransferase FkbM n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28JC0_JANSC
methyltransferase FkbM
Methyltransferase FkbM {ECO:0000313|EMBL:ABD57192.1}; TaxID=290400 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia sp. (strain CCS1).;"
S12_scaffold_283_curated_7
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8004..10058)
DNA (2055bp) protein (685aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3A8_NOVAD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD27665.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
S12_scaffold_283_curated_8
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10058..10327)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000301528F
Uncharacterized protein {ECO:0000313|EMBL:CCW20084.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
hypothetical protein
S12_scaffold_283_curated_9
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10556..11497
DNA (942bp) protein (314aa)
Glycosyl transferase, family 2 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3B2_NOVAD rbh
glycosyl transferase rbh
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABD27661.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
S12_scaffold_283_curated_10
Citreicella sp. 357, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11500..12066
DNA (567bp) protein (189aa)
Hexapeptide repeat-containing transferase n=1 Tax=Citreicella sp. 357 RepID=I1ARE8_9RHOB
Hexapeptide repeat-containing transferase {ECO:0000313|EMBL:EIE49069.1}; TaxID=766499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. 357.;"
hexapaptide repeat-containing transferase
S12_scaffold_283_curated_11
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12088..13275)
DNA (1188bp) protein (396aa)
Glycosyl transferase, group 1 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3B3_NOVAD rbh
group 1 glycosyl transferase rbh
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABD27660.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
S12_scaffold_283_curated_12
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13359..15590)
DNA (2232bp) protein (744aa)
Protein-tyrosine kinase {ECO:0000313|EMBL:ABD27659.1}; EC=2.7.10.1 {ECO:0000313|EMBL:ABD27659.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
Protein-tyrosine kinase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3B4_NOVAD rbh
protein-tyrosine kinase rbh
S12_scaffold_283_curated_13
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15608..16327)
DNA (720bp) protein (240aa)
Polysaccharide export protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3B5_NOVAD
polysaccharide export protein
Polysaccharide export protein {ECO:0000313|EMBL:ABD27658.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
S12_scaffold_283_curated_14
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16510..17214
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3B6_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27657.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
S12_scaffold_283_curated_15
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17186..17674)
DNA (489bp) protein (163aa)
pssE; polysaccharide biosynthesis glucuronosyltransferase (EC:2.4.1.141)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002EC7462
Glucuronosyltransferase {ECO:0000313|EMBL:KEO88615.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;"
S12_scaffold_283_curated_16
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17671..18117)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002F2C274
Glucuronosyltransferase {ECO:0000313|EMBL:KEO88614.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;"
oligosaccharide biosynthesis protein Alg14-like protein
S12_scaffold_283_curated_17
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18246..19157
DNA (912bp) protein (304aa)
Peptidase M48, Ste24p n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3B9_NOVAD rbh
peptidase M48, Ste24p rbh
Peptidase M48, Ste24p {ECO:0000313|EMBL:ABD27654.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
S12_scaffold_283_curated_18
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19184..20587)
DNA (1404bp) protein (468aa)
Sugar transferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3C0_NOVAD rbh
sugar transferase rbh
Sugar transferase {ECO:0000313|EMBL:ABD27653.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
S12_scaffold_283_curated_19
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20792..21808)
DNA (1017bp) protein (339aa)
DNA polymerase III subunit delta (EC:2.7.7.7) rbh
DNA polymerase III, delta subunit {ECO:0000313|EMBL:ABD27652.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABD27652.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
DNA polymerase III, delta subunit n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3C1_NOVAD rbh
S12_scaffold_283_curated_20
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21819..22319)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3C2_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27651.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
S12_scaffold_283_curated_21
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(22309..24870)
DNA (2562bp) protein (854aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4) rbh
Leucine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000255|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00049}; Short=LeuRS {ECO:0000255|HAMAP-Rule:MF_00049};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
Leucine--tRNA ligase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=SYL_NOVAD rbh
S12_scaffold_283_curated_22
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24925..25404)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3C4_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27649.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
S12_scaffold_283_curated_23
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25859..26638
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3C5_NOVAD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD27648.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
S12_scaffold_283_curated_24
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26850..27572
DNA (723bp) protein (241aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100) rbh
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:ABD27647.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ABD27647.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3C6_NOVAD rbh
S12_scaffold_283_curated_25
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27595..27921
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3C7_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27646.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
S12_scaffold_283_curated_26
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27891..28103)
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:KHS45113.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
S12_scaffold_283_curated_27
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28196..28501)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKB3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHS45112.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hypothetical protein
S12_scaffold_283_curated_28
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28681..29748
DNA (1068bp) protein (356aa)
Transcriptional regulator, ArsR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3C9_NOVAD rbh
ArsR family transcriptional regulator rbh
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ABD27644.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
S12_scaffold_283_curated_29
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29755..30696
DNA (942bp) protein (314aa)
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20) rbh
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
Methylenetetrahydrofolate reductase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3D0_NOVAD rbh
S12_scaffold_283_curated_30
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30693..31754
DNA (1062bp) protein (354aa)
methionine synthase (B12-dependent) (EC:2.1.1.13) rbh
Methionine synthase (B12-dependent) {ECO:0000313|EMBL:ABD27642.1}; EC=2.1.1.13 {ECO:0000313|EMBL:ABD27642.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
Methionine synthase (B12-dependent) n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3D1_NOVAD rbh
Displaying items 1-30 of 58 in total

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