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S12_scaffold_3111_curated

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_3111_curated_1
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..217
DNA (216bp) protein (72aa)
gltA; citrate (Si)-synthase (EC:2.3.3.1)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
type II citrate synthase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DCF929
S12_scaffold_3111_curated_2
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(358..1533)
DNA (1176bp) protein (392aa)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182) rbh
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F689DD rbh
S12_scaffold_3111_curated_3
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1584..2480)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EF1B76 rbh
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ47123.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
hypothetical protein
S12_scaffold_3111_curated_4
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2477..3277)
DNA (801bp) protein (267aa)
lpxA; Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387};; EC=2.3.1.129 {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00001267};; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
UDP-N-acetylglucosamine acyltransferase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F66436 rbh
S12_scaffold_3111_curated_5
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3282..3746)
DNA (465bp) protein (155aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
3-hydroxyacyl-ACP dehydratase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E46DBF
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase
S12_scaffold_3111_curated_6
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3772..4842)
DNA (1071bp) protein (357aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000255|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000255|HAMAP-Rule:MF_00523};; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=LPXD_METS4 rbh
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase rbh
S12_scaffold_3111_curated_7
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4912..5250)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000379A8E2
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
outer membrane protein assembly factor
S12_scaffold_3111_curated_8
unknown

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5433..5957
DNA (525bp) protein (175aa)

This feature has no annotations

S12_scaffold_3111_curated_9
unknown

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6369..7424
DNA (1056bp) protein (352aa)

This feature has no annotations

S12_scaffold_3111_curated_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7513..8358)
DNA (846bp) protein (282aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DB6813 rbh
membrane-associated zinc metalloprotease rbh
Displaying 10 items

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