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S12_scaffold_761_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_761_curated_1
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..665)
DNA (663bp) protein (221aa)
hypothetical protein, partial n=1 Tax=Ancylobacter sp. FA202 RepID=UPI00035F15C3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF87913.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
S12_scaffold_761_curated_2
unknown

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707..1360
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3F2E2_STEMA
S12_scaffold_761_curated_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1511..5248)
DNA (3738bp) protein (1246aa)
hypothetical protein n=3 Tax=Xanthobacteraceae RepID=UPI0003806DF2
Uncharacterized protein {ECO:0000313|EMBL:KKB07435.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
S12_scaffold_761_curated_trna_2
unknown

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comp(5961..6033)
DNA (73bp)
transferRNA Asn
S12_scaffold_761_curated_4
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6133..7932)
DNA (1800bp) protein (600aa)
ABC transporter related protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZ94_STAND rbh
ABC transporter rbh
ABC transporter related protein {ECO:0000313|EMBL:ADH89230.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S12_scaffold_761_curated_trna_1
unknown

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comp(8148..8218)
DNA (71bp)
transferRNA Cys
S12_scaffold_761_curated_5
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8519..9181
DNA (663bp) protein (221aa)
protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77) rbh
Protein-L-isoaspartate(D-aspartate) O-methyltransferase {ECO:0000313|EMBL:ADH89229.1}; EC=2.1.1.77 {ECO:0000313|EMBL:ADH89229.1};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
Protein-L-isoaspartate(D-aspartate) O-methyltransferase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZ93_STAND rbh
S12_scaffold_761_curated_6
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9356..10765
DNA (1410bp) protein (470aa)
channel protein TolC n=1 Tax=Xanthobacteraceae RepID=UPI000371F0BA rbh
TolC family type I secretion outer membrane protein rbh
Type I secretion outer membrane protein, TolC family {ECO:0000313|EMBL:ADH89228.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S12_scaffold_761_curated_7
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10950..12113
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZ91_STAND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH89227.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S12_scaffold_761_curated_8
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12233..15067
DNA (2835bp) protein (945aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
valyl-tRNA synthetase n=1 Tax=Xanthobacteraceae RepID=UPI00038205F0 rbh
valyl-tRNA synthetase rbh
S12_scaffold_761_curated_9
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15101..15817
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00037BC2FC rbh
Methyltransferase {ECO:0000313|EMBL:KJC58150.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
MgtC/SapB transporter
S12_scaffold_761_curated_10
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15830..16240)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZ65_STAND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH89201.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S12_scaffold_761_curated_11
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16500..18227
DNA (1728bp) protein (576aa)
dihydroxy-acid dehydratase (EC:4.2.1.9) rbh
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
dihydroxy-acid dehydratase n=1 Tax=Xanthobacteraceae RepID=UPI000378B74E rbh
S12_scaffold_761_curated_12
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18214..19077
DNA (864bp) protein (288aa)
Exopolysaccharide regulatory protein exoR n=1 Tax=Xanthobacteraceae RepID=UPI00037BB77E rbh
Sel1 domain-containing protein repeat-containing protein rbh
Sel1 domain protein repeat-containing protein {ECO:0000313|EMBL:ADH89199.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S12_scaffold_761_curated_13
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19143..19928)
DNA (786bp) protein (262aa)
Exodeoxyribonuclease III n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZ62_STAND rbh
exodeoxyribonuclease III rbh
Exodeoxyribonuclease III {ECO:0000313|EMBL:ADH89198.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S12_scaffold_761_curated_14
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19968..20717)
DNA (750bp) protein (250aa)
MTA/SAH nucleosidase (EC:3.2.2.9) rbh
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
MTA/SAH nucleosidase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZ60_STAND rbh
S12_scaffold_761_curated_15
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20717..21094)
DNA (378bp) protein (126aa)
Iron-sulfur cluster assembly accessory protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZ59_STAND
iron-sulfur cluster assembly accessory protein
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:ADH89195.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S12_scaffold_761_curated_16
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21199..22371
DNA (1173bp) protein (391aa)
deoxyguanosinetriphosphate triphosphohydrolase n=1 Tax=Xanthobacteraceae RepID=UPI00037E9C0E rbh
deoxyguanosinetriphosphate triphosphohydrolase rbh
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S12_scaffold_761_curated_17
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


22423..24189
DNA (1767bp) protein (589aa)
arginyl-tRNA synthetase (EC:6.1.1.19) rbh
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
Arginine--tRNA ligase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZ57_STAND rbh
S12_scaffold_761_curated_18
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24285..24440
DNA (156bp) protein (52aa)
Sporulation domain protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZ56_STAND
sporulation domain-containing protein
Sporulation domain protein {ECO:0000313|EMBL:ADH89192.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
Displaying 20 items

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