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S13_scaffold_1_curated

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Displaying items 1-30 of 438 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_1_curated_1
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

118..885
DNA (768bp) protein (256aa)
Putative uncharacterized protein id=4193321 bin=GWF2_Tenericutes_35_184 species=Methanohalobium evestigatum genus=Methanohalobium taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35
hypothetical protein
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_1_curated_2
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(911..2449)
DNA (1539bp) protein (513aa)
Diguanylate cyclase with PAS/PAC sensor id=4193320 bin=GWF2_Tenericutes_35_184 species=Clostridium butyricum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35 rbh
diguanylate cyclase
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_1_curated_3
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

comp(2619..3311)
DNA (693bp) protein (231aa)
ABC transporter id=2426477 bin=GWF1_Tenericute_35_14 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Tenericute_35_14 organism_group=Tenericutes rbh
ABC transporter, ATP-binding subunit
Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
S13_scaffold_1_curated_4
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

comp(3304..4470)
DNA (1167bp) protein (389aa)
ABC-type transport system, involved in lipoprotein release, permease component id=4682634 bin=GWC2_Tenericute_34_14 species=unknown genus=Mesotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Tenericute_34_14 organism_group=Tenericutes organism_desc=Good + rbh
Lipoprotein releasing system transmembrane protein
Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
S13_scaffold_1_curated_5
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

comp(4467..4778)
DNA (312bp) protein (104aa)
Cobalamin B12-binding domain protein id=4193317 bin=GWF2_Tenericutes_35_184 species=Clostridium cellulovorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35
Cobalamin B12-binding domain protein
Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
S13_scaffold_1_curated_6
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

Not on your lists

comp(4801..5115)
DNA (315bp) protein (105aa)
Cobalamin B12-binding domain protein id=2709463 bin=GWA2_Tenericute_38_26 species=Clostridium cellulovorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
Cobalamin B12-binding domain protein
Tax=GWE2_Tenericutes_38_8_curated
S13_scaffold_1_curated_7
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists


comp(5239..6240)
DNA (1002bp) protein (334aa)
Protein RecA id=4193316 bin=GWF2_Tenericutes_35_184 species=Ornithinibacillus scapharcae genus=Ornithinibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35 rbh
recA; Recombinase A
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_1_curated_8
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(6286..6897)
DNA (612bp) protein (204aa)
pgsA; Phosphatidylglycerophosphate synthase (EC:2.7.8.5)
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase id=2709457 bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome rbh
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_1_curated_9
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists


6970..7230
DNA (261bp) protein (87aa)
30S ribosomal protein S20 id=2709454 bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
rpsT; 30S ribosomal protein S20
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_1_curated_10
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(7262..7918)
DNA (657bp) protein (219aa)
dnaQ; DNA polymerase III, epsilon subunit (EC:2.7.7.7)
DNA polymerase III, epsilon subunit id=4682629 bin=GWC2_Tenericute_34_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWC2_Tenericute_34_14 organism_group=Tenericutes organism_desc=Good + rbh
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_1_curated_11
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(7922..8869)
DNA (948bp) protein (316aa)
holA; DNA polymerase III, delta subunit (EC:2.7.7.7)
DNA polymerase III, delta subunit id=2426511 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes rbh
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_1_curated_12
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(8915..10996)
DNA (2082bp) protein (694aa)
Late competence protein ComEC id=2426512 bin=GWF1_Tenericute_35_14 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF1_Tenericute_35_14 organism_group=Tenericutes rbh
comEC; DNA internalization-related competence protein ComEC/Rec2-related
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_1_curated_13
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(10965..11471)
DNA (507bp) protein (169aa)
Competence protein, comEA id=3908404 bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
competence protein ComEA
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_1_curated_14
Helcococcus kunzii, Helcococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11593..12126
DNA (534bp) protein (178aa)
Putative uncharacterized protein n=1 Tax=Helcococcus kunzii ATCC 51366 RepID=H3NR30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR31978.1}; TaxID=883114 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Helcococcus.;" source="Helcococcus kunzii ATCC 51366.;"
hypothetical protein
S13_scaffold_1_curated_15
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(12158..12799)
DNA (642bp) protein (214aa)
Methyltransferase type 12 id=3908405 bin=GWA2_Tenericute_38_26 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
Methyltransferase type 11 protein
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_1_curated_16
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(12800..13114)
DNA (315bp) protein (105aa)
Putative uncharacterized protein id=4193253 bin=GWF2_Tenericutes_35_184 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35
Iojap-like protein
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_1_curated_17
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(13098..13670)
DNA (573bp) protein (191aa)
Predicted HD superfamily hydrolase id=3908407 bin=GWA2_Tenericute_38_26 species=Onion yellows phytoplasma genus=Candidatus Phytoplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
Predicted metal-dependent phosphohydrolase, HD domain
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_1_curated_18
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(13667..14689)
DNA (1023bp) protein (341aa)
GTP-binding protein id=3908408 bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome rbh
GTP-binding protein
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_1_curated_19
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(14673..15221)
DNA (549bp) protein (183aa)
Hydrolase, HAD superfamily id=3908409 bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
Hydrolase, HAD superfamily
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_1_curated_20
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(15221..15694)
DNA (474bp) protein (158aa)
Transcription elongation factor GreA id=3908410 bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
greA; Transcription elongation factor GreA
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_1_curated_21
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(15737..16399)
DNA (663bp) protein (221aa)
Putative uncharacterized protein id=4682613 bin=GWC2_Tenericute_34_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWC2_Tenericute_34_14 organism_group=Tenericutes organism_desc=Good +
conserved hypothetical protein (DUF45)
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_1_curated_22
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(16399..17577)
DNA (1179bp) protein (393aa)
yhbU; putative protease YhbU precursor (EC:3.4.-.-)
Collagenase family protease id=2426530 bin=GWF1_Tenericute_35_14 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF1_Tenericute_35_14 organism_group=Tenericutes rbh
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_1_curated_23
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(17570..18460)
DNA (891bp) protein (297aa)
Peptidase U32 family protein id=4193246 bin=GWF2_Tenericutes_35_184 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35 rbh
Peptidase U32 family protein
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_1_curated_24
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(18457..19023)
DNA (567bp) protein (189aa)
O-methyltransferase, family 3 id=2426535 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
O-methyltransferase, family 3
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_1_curated_25
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(19023..19313)
DNA (291bp) protein (97aa)
Putative uncharacterized protein id=2426537 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
conserved hypothetical protein (DUF1292)
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_1_curated_26
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(19307..19735)
DNA (429bp) protein (143aa)
Putative Holliday junction resolvase id=2426539 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
Putative Holliday junction resolvase
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_1_curated_27
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists


comp(19732..22311)
DNA (2580bp) protein (860aa)
alaS; Alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase id=4193242 bin=GWF2_Tenericutes_35_184 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35 rbh
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_1_curated_28
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(22581..23708)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Enterobacter cloacae RepID=UPI0002FADAED
hypothetical protein
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_1_curated_29
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(23933..24394)
DNA (462bp) protein (154aa)
GCN5-related N-acetyltransferase id=4193240 bin=GWF2_Tenericutes_35_184 species=unknown genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35
predicted acetyltransferase
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_1_curated_30
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(24339..25202)
DNA (864bp) protein (288aa)
Putative membrane-associated phosphatase id=4193239 bin=GWF2_Tenericutes_35_184 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35 rbh
pgpB; Membrane-associated phospholipid phosphatase
Tax=BJP_IG2102_Acholeplasmatales_34_18
Displaying items 1-30 of 438 in total

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