name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
S13_scaffold_276_curated_1
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..447
|
Aldo/keto reductase id=1262409 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
aldo/keto reductase
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
S13_scaffold_276_curated_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
447..938
|
YbaK/ebsC protein id=1262410 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
ybaK/ebsC protein
Tax=GWE1_Burkholderiales_65_30_curated
|
|
S13_scaffold_276_curated_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1003..1632
|
glycerol-3-phosphate acyltransferase; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] id=5079851 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
glycerol-3-phosphate acyltransferase
rbh
Tax=GWE1_Burkholderiales_65_30_curated
|
|
S13_scaffold_276_curated_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1629..1985
|
endoribonuclease l-psp id=5079852 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
endoribonuclease l-psp
Tax=GWE1_Burkholderiales_65_30_curated
|
|
S13_scaffold_276_curated_5
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1990..2640)
|
hypothetical protein; K06985 aspartyl protease family protein id=5079853 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
S13_scaffold_276_curated_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2743..3234)
|
putative nucleotide-binding protein; K09767 hypothetical protein id=5079854 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
putative nucleotide-binding protein
Tax=GWE1_Burkholderiales_65_30_curated
|
|
S13_scaffold_276_curated_7
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3275..4324
|
UDP-N-acetylenolpyruvoylglucosamine reductase; K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] id=5079855 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
UDP-N-acetylenolpyruvoylglucosamine reductase
rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
S13_scaffold_276_curated_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4367..4969
|
signal peptide id=5079856 bin=GWF1_Burkholderiales_GWF1_66_17 species=Herminiimonas arsenicoxydans genus=Herminiimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
signal peptide
Tax=GWE1_Burkholderiales_65_30_curated
|
|
S13_scaffold_276_curated_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4976..6556
|
hypothetical protein id=5079857 bin=GWF1_Burkholderiales_GWF1_66_17 species=Parvibaculum lavamentivorans genus=Parvibaculum taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
hypothetical protein
rbh
Tax=GWE1_Burkholderiales_65_30_curated
|
|
S13_scaffold_276_curated_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6631..7971)
|
argininosuccinate synthase (EC:6.3.4.5)
rbh
Argininosuccinate synthase id=1262418 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
Tax=GWE1_Burkholderiales_65_30_curated
|
|
S13_scaffold_276_curated_11
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7980..8297)
|
UPF0345 protein CARN2_1253 id=1262419 bin=GWE1_Burkholderiales_65_30 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
|
|
S13_scaffold_276_curated_12
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8356..8703)
|
Transcriptional regulator, Spx/MgsR family id=1262420 bin=GWE1_Burkholderiales_65_30 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
arsenate reductase-like protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
|
|
S13_scaffold_276_curated_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8760..9707
|
pip; Proline iminopeptidase (PIP) (Prolyl aminopeptidase) (PAP) (EC:3.4.11.5)
rbh
Proline iminopeptidase id=1262421 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
Tax=GWE1_Burkholderiales_65_30_curated
|
|
S13_scaffold_276_curated_14
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9738..11087
|
bifunctional folylpolyglutamate synthase/dihydrofolate synthase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] id=5079862 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
S13_scaffold_276_curated_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11164..11922
|
sporulation domain-containing protein; K03749 DedD protein id=5079863 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
sporulation domain-containing protein
Tax=GWE1_Burkholderiales_65_30_curated
|
|
S13_scaffold_276_curated_16
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11954..12439
|
colicin V production protein; K03558 membrane protein required for colicin V production id=5079864 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
uncharacterized membrane protein, required for colicin V production
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
S13_scaffold_276_curated_17
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12473..13975
|
amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14] id=5079865 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
amidophosphoribosyltransferase (EC:2.4.2.14)
rbh
Tax=GWE1_Burkholderiales_65_30_curated
|
|
S13_scaffold_276_curated_18
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13983..15191
|
O-succinylhomoserine sulfhydrylase id=1262426 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
cystathionine beta-lyase/cystathionine gamma-synthase
Tax=GWE1_Burkholderiales_65_30_curated
|
|
S13_scaffold_276_curated_19
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15278..16666
|
Glutamate--tRNA ligase id=1262427 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
gltX; glutamyl-tRNA ligase
rbh
Tax=GWE1_Burkholderiales_65_30_curated
|
|
S13_scaffold_276_curated_trna_1
unknown
|
Not on your lists |
16742..16814
|
transferRNA Ala
|
|
S13_scaffold_276_curated_trna_2
unknown
|
Not on your lists |
16893..16965
|
transferRNA Glu
|
|
S13_scaffold_276_curated_trna_3
unknown
|
Not on your lists |
17023..17096
|
transferRNA Asp
|
|
S13_scaffold_276_curated_20
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17203..18111)
|
Putative DMT superfamily transporter inner membrane protein {ECO:0000313|EMBL:EWS64171.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
hypothetical protein id=5079868 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
hypothetical protein
rbh
|
|
S13_scaffold_276_curated_21
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18116..18694)
|
methylated-DNA--protein-cysteine methyltransferase (EC:2.1.1.63)
Methylated-DNA--protein-cysteine methyltransferase id=1262429 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
Tax=GWE1_Burkholderiales_65_30_curated
|
|
S13_scaffold_276_curated_22
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18691..20235)
|
DNA-O6-methylguanine--protein-cysteine S-methyltransferase / DNA-3-methyladenine glycosylase II / transcriptional regulator Ada (EC:3.2.2.21 2.1.1.63); K13529 AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] id=5079870 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
DNA-O6-methylguanine--protein-cysteine S-methyltransferase / DNA-3-methyladenine glycosylase II / transcriptional regulator Ada (EC:3.2.2.21 2.1.1.63)
rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
S13_scaffold_276_curated_23
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20343..21725
|
phosphomannomutase (EC:5.4.2.8)
rbh
Phosphomannomutase/phosphoglucomutase id=1262431 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
Tax=GWE1_Burkholderiales_65_30_curated
|
|
S13_scaffold_276_curated_24
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21825..23120
|
hypothetical protein id=5079872 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
S13_scaffold_276_curated_25
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23175..24026
|
Hyaluronan synthase {ECO:0000313|EMBL:EWS65428.1}; EC=2.4.1.212 {ECO:0000313|EMBL:EWS65428.1};; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
family 2 glycosyl transferase id=5079873 bin=GWF1_Burkholderiales_GWF1_66_17 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
family 2 glycosyl transferase
rbh
|
|
S13_scaffold_276_curated_26
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24109..26136)
|
kdtA; 3-deoxy-D-manno-octulosonic-acid transferase; K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] id=5079874 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
3-deoxy-D-manno-octulosonic-acid transferase
rbh
Tax=GWE1_Burkholderiales_65_30_curated
|
|
S13_scaffold_276_curated_27
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26112..26852)
|
glycosyltransferase id=5079875 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
glycosyltransferase
rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
|