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S13_scaffold_281_curated

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_281_curated_1
R_Coxiella_42_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..683
DNA (681bp) protein (227aa)
Putative uncharacterized protein n=2 Tax=Pseudomonas syringae pv. maculicola RepID=F3HEK1_PSEYM
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Coxiella_42_15_curated
S13_scaffold_281_curated_2
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

975..2168
DNA (1194bp) protein (398aa)
Polysaccharide biosynthesis protein-like protein (Fragment) n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SIF9_RHOPH
Polysaccharide biosynthesis protein-like protein
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_281_curated_3
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2138..3142
DNA (1005bp) protein (335aa)
group 1 glycosyl transferase id=5079937 bin=GWF1_Burkholderiales_GWF1_66_17 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
glycosyl transferase, group 1
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_281_curated_4
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3144..5846
DNA (2703bp) protein (901aa)
group 1 glycosyl transferase id=5079936 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
group 1 glycosyl transferase rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_281_curated_5
Burkholderia sp. CCGE1001, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6107..7126
DNA (1020bp) protein (340aa)
Chondroitin 4-O-sulfotransferase n=1 Tax=Burkholderia bryophila RepID=UPI000382C978 rbh
Chondroitin 4-O-sulfotransferase
Chondroitin 4-O-sulfotransferase {ECO:0000313|EMBL:ADX54095.1}; TaxID=640510 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. CCGE1001.;"
S13_scaffold_281_curated_6
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7147..8190
DNA (1044bp) protein (348aa)
group 1 glycosyl transferase id=5079935 bin=GWF1_Burkholderiales_GWF1_66_17 species=Cupriavidus sp. HPC(L) genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_281_curated_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8313..9281
DNA (969bp) protein (323aa)
mannosyltransferase B id=5079932 bin=GWF1_Burkholderiales_GWF1_66_17 species=Cupriavidus sp. HPC(L) genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
mannosyltransferase B rbh
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_281_curated_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9278..9895
DNA (618bp) protein (206aa)
phosphoglycerate mutase; K01834 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.1] id=5079931 bin=GWF1_Burkholderiales_GWF1_66_17 species=Dickeya dadantii genus=Dickeya taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
phosphoglycerate mutase
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_281_curated_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9892..10938
DNA (1047bp) protein (349aa)
Uncharacterized protein id=1262490 bin=GWE1_Burkholderiales_65_30 species=Cupriavidus sp. HPC(L) genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_281_curated_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10953..11828
DNA (876bp) protein (292aa)
Uncharacterized protein id=1262489 bin=GWE1_Burkholderiales_65_30 species=Burkholderia cenocepacia genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_281_curated_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11867..12817
DNA (951bp) protein (317aa)
glycosyltransferase involved in cell wall biogenesis-like protein (EC:2.4.1.83) id=5079928 bin=GWF1_Burkholderiales_GWF1_66_17 species=Thioalkalivibrio thiocyanoxidans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
glycosyl transferase
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_281_curated_12
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12851..13939
DNA (1089bp) protein (363aa)
hypothetical protein id=5079927 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
acyltransferase 3
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_281_curated_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13936..14871
DNA (936bp) protein (312aa)
NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase:NmrA-like id=1262486 bin=GWE1_Burkholderiales_65_30 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
NAD-dependent dehydratase
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_281_curated_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14868..15428
DNA (561bp) protein (187aa)
wcaJ; undecaprenyl-phosphate galactose phosphotransferase; K13012 O-antigen biosynthesis protein WbqP id=5079925 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
wcaJ; undecaprenyl-phosphate galactose phosphotransferase
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_281_curated_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15445..17379
DNA (1935bp) protein (645aa)
capD; polysaccharide biosynthesis protein (EC:4.2.1.46) id=5079924 bin=GWF1_Burkholderiales_GWF1_66_17 species=Herbaspirillum seropedicae genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
capD; polysaccharide biosynthesis protein (EC:4.2.1.46) rbh
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_281_curated_16
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17487..18629
DNA (1143bp) protein (381aa)
oxidoreductase domain-containing protein id=5079923 bin=GWF1_Burkholderiales_GWF1_66_17 species=Pseudomonas sp. HPB0071 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
oxidoreductase domain-containing protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_281_curated_17
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18708..20672
DNA (1965bp) protein (655aa)
acyltransferase (EC:2.3.1.-) id=5079922 bin=GWF1_Burkholderiales_GWF1_66_17 species=Bradyrhizobium sp. genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
O-antigen acetylase
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_281_curated_18
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20780..22672)
DNA (1893bp) protein (631aa)
DEAD/DEAH box helicase id=5079921 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
DEAD/DEAH box helicase rbh
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_281_curated_19
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23034..24620)
DNA (1587bp) protein (529aa)
phosphate permease; K03306 inorganic phosphate transporter, PiT family id=5079920 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
phosphate permease
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_281_curated_20
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24736..25416)
DNA (681bp) protein (227aa)
oligoribonuclease; K13288 oligoribonuclease [EC:3.1.-.-] id=5079919 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
oligoribonuclease rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_281_curated_21
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25446..26720
DNA (1275bp) protein (425aa)
Ste24 endopeptidase (EC:3.4.24.84); K06013 STE24 endopeptidase [EC:3.4.24.84] id=5079918 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
Ste24 endopeptidase (EC:3.4.24.84) rbh
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_281_curated_22
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26751..27071
DNA (321bp) protein (107aa)
transcriptional coactivator/pterin dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] id=5079917 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
transcriptional coactivator/pterin dehydratase
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_281_curated_23
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27104..28075
DNA (972bp) protein (324aa)
ribosome small subunit-dependent GTPase A; K06949 ribosome biogenesis GTPase [EC:3.6.1.-] id=5079916 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
ribosome small subunit-dependent GTPase A rbh
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_281_curated_24
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28083..29018)
DNA (936bp) protein (312aa)
hypothetical protein; K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10] id=5079915 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_281_curated_25
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29108..29860)
DNA (753bp) protein (251aa)
NUDIX hydrolase id=1262474 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
NUDIX hydrolase rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_281_curated_26
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(29909..30265)
DNA (357bp) protein (119aa)
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 id=5079913 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
rplS; 50S ribosomal protein L19
S13_scaffold_281_curated_27
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30411..31187)
DNA (777bp) protein (259aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] id=5079912 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31) rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_281_curated_28
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31452..32042)
DNA (591bp) protein (197aa)
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
rimM; 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM id=5079911 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
rimM; 16S rRNA-processing protein RimM
S13_scaffold_281_curated_29
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(32091..32348)
DNA (258bp) protein (86aa)
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 id=5079910 bin=GWF1_Burkholderiales_GWF1_66_17 species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rpsP; ribosomal protein S16
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_281_curated_30
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32542..33081
DNA (540bp) protein (180aa)
N-acetyltransferase GCN5 id=1262469 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
N-acetyltransferase GCN5
Tax=GWE1_Burkholderiales_65_30_curated
Displaying items 1-30 of 45 in total

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