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S13_scaffold_280_curated

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Displaying items 1-30 of 51 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_280_curated_1
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..455)
DNA (453bp) protein (151aa)
DEAD_2 domain-containing protein id=1268649 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
S13_scaffold_280_curated_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

505..1338
DNA (834bp) protein (278aa)
Putative uncharacterized protein id=1268648 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_280_curated_3
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1492..1935
DNA (444bp) protein (148aa)
Hypoxic response protein 1 {ECO:0000313|EMBL:EWS64034.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
hypothetical protein id=5082175 bin=GWF1_Burkholderiales_GWF1_66_17 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
signal transduction protein with CBS domains
S13_scaffold_280_curated_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1962..2834
DNA (873bp) protein (291aa)
Putative membrane protein id=1268637 bin=GWE1_Burkholderiales_65_30 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
ribonuclease BN rbh
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_280_curated_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2865..3422)
DNA (558bp) protein (186aa)
Mg(2+) transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein id=5082173 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
Mg(2+) transporter
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_280_curated_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3486..4316)
DNA (831bp) protein (277aa)
hypothetical protein id=5082172 bin=GWF1_Burkholderiales_GWF1_66_17 species=Nitrosospira multiformis genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
CBS domain-containing protein
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_280_curated_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4333..4599)
DNA (267bp) protein (89aa)
id=5082171 bin=GWF1_Burkholderiales_GWF1_66_17 species=Volvox carteri genus=Volvox taxon_order=Chlamydomonadales taxon_class=Chlorophyceae phylum=Chlorophyta tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_280_curated_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5222..8989
DNA (3768bp) protein (1256aa)
multi-sensor hybrid histidine kinase id=5082170 bin=GWF1_Burkholderiales_GWF1_66_17 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
multi-sensor hybrid histidine kinase rbh
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_280_curated_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9019..11331)
DNA (2313bp) protein (771aa)
catalase (EC:1.11.1.6) rbh
Catalase id=1268632 bin=GWE1_Burkholderiales_65_30 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_280_curated_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11390..11677)
DNA (288bp) protein (96aa)
hypothetical protein id=5082168 bin=GWF1_Burkholderiales_GWF1_66_17 species=Delftia acidovorans genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_280_curated_11
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11712..12029)
DNA (318bp) protein (106aa)
Uncharacterized protein {ECO:0000313|EMBL:EWS62360.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
id=5082167 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
S13_scaffold_280_curated_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12217..12438)
DNA (222bp) protein (74aa)
cardiolipin synthetase (EC:2.7.8.-); K06131 cardiolipin synthase [EC:2.7.8.-] id=5082165 bin=GWF1_Burkholderiales_GWF1_66_17 species=Cupriavidus taiwanensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
cardiolipin synthetase (EC:2.7.8.-)
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_280_curated_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12503..12721)
DNA (219bp) protein (73aa)
Uncharacterized protein id=1268627 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_280_curated_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12902..13279)
DNA (378bp) protein (126aa)
hypothetical protein id=5082163 bin=GWF1_Burkholderiales_GWF1_66_17 species=Rubrivivax gelatinosus genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_280_curated_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13299..13769)
DNA (471bp) protein (157aa)
hypothetical protein id=5082162 bin=GWF1_Burkholderiales_GWF1_66_17 species=Cellvibrio sp. BR genus=Cellvibrio taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_280_curated_16
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13799..14008
DNA (210bp) protein (70aa)
Uncharacterized protein {ECO:0000313|EMBL:EWS63504.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
S13_scaffold_280_curated_17
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13915..14901)
DNA (987bp) protein (329aa)
hypothetical protein id=5082161 bin=GWF1_Burkholderiales_GWF1_66_17 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_280_curated_18
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15248..16201
DNA (954bp) protein (318aa)
Putative uncharacterized protein id=1268623 bin=GWE1_Burkholderiales_65_30 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_280_curated_19
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16234..16509)
DNA (276bp) protein (92aa)
Putative uncharacterized protein id=5082159 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_280_curated_20
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16859..17359)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI00037A30C8
Truncated hemoglobin {ECO:0000313|EMBL:EWS63726.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
S13_scaffold_280_curated_21
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17599..18621)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46SJ4_CUPPJ rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_280_curated_22
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18628..20256)
DNA (1629bp) protein (543aa)
AMP-dependent synthetase and ligase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y2U5_LEPCP rbh
AMP-dependent synthetase and ligase rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_280_curated_23
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20260..21429)
DNA (1170bp) protein (390aa)
Porin, Gram-negative type n=1 Tax=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) RepID=Q0B2Z1_BURCM
porin
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_280_curated_24
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21613..22593)
DNA (981bp) protein (327aa)
ABC transporter substrate-binding protein n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI0003635871 rbh
extra-cytoplasmic solute receptor rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_280_curated_25
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22736..23776
DNA (1041bp) protein (347aa)
AraC family transcriptional regulator n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QVH8_RALPI rbh
AraC family transcriptional regulator
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_280_curated_26
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23896..24876
DNA (981bp) protein (327aa)
qor3; quinone oxidoreductase Qor (EC:1.6.5.5) rbh
quinone oxidoreductase n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI00037FD324 rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_280_curated_27
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24909..25757
DNA (849bp) protein (283aa)
taurine dioxygenase (EC:1.14.11.17) rbh
Taurine dioxygenase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1RXZ0_9BURK rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_280_curated_28
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25788..26846
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. RPE64 RepID=R4WPS0_9BURK rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX13169.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
S13_scaffold_280_curated_29
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26846..27460
DNA (615bp) protein (205aa)
Serin hydrolase domain-containing protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X887_VARPD
serin hydrolase domain-containing protein
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_280_curated_30
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27421..28242)
DNA (822bp) protein (274aa)
hypothetical protein id=5082158 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Displaying items 1-30 of 51 in total

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