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S13_scaffold_136_curated

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Displaying items 1-30 of 86 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_136_curated_1
unknown

Not on your lists

2..79
DNA (78bp) protein (26aa)

This feature has no annotations

S13_scaffold_136_curated_2
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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76..1557
DNA (1482bp) protein (494aa)
hypothetical protein id=5081430 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_136_curated_3
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1554..2819
DNA (1266bp) protein (422aa)
hypothetical protein id=5081429 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_136_curated_4
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2816..3613
DNA (798bp) protein (266aa)
phosphotransferase domain-containing protein; K01104 protein-tyrosine phosphatase [EC:3.1.3.48] id=5081428 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
phosphotransferase domain-containing protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_136_curated_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3723..4214
DNA (492bp) protein (164aa)
id=5081427 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_136_curated_6
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4301..4606)
DNA (306bp) protein (102aa)
plasmid stabilization protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI00023764DD
Plasmid stabilization system protein {ECO:0000313|EMBL:EXI86898.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
plasmid stabilization system protein
S13_scaffold_136_curated_7
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4603..4872)
DNA (270bp) protein (90aa)
Putative transcriptional regulator, CopG/Arc/MetJ family n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X762_THIK1
KluA {ECO:0000313|EMBL:CDW96543.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
CopG family transcriptional regulator
S13_scaffold_136_curated_8
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5151..6131
DNA (981bp) protein (327aa)
UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] id=5081426 bin=GWF1_Burkholderiales_GWF1_66_17 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
UDP-glucose 4-epimerase
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_136_curated_9
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6122..6622)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036494A4
spore coat U domain-containing protein
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_136_curated_10
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6619..8928)
DNA (2310bp) protein (770aa)
Fimbrial biogenesis outer membrane usher protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VIJ1_POLNA rbh
fimbrial biogenesis outer membrane usher protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_136_curated_11
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8928..9653)
DNA (726bp) protein (242aa)
Putative pilus assembly protein chaperone n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AC45_COLFT
papD; putative pilus assembly protein chaperone
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_136_curated_12
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9658..10140)
DNA (483bp) protein (161aa)
Putative secreted protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2H2F8_9SPHN
Putative secreted protein {ECO:0000313|EMBL:EWS64206.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
spore coat protein U
S13_scaffold_136_curated_13
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10383..10820
DNA (438bp) protein (146aa)
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_136_curated_14
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10847..11500)
DNA (654bp) protein (218aa)
4-diphosphocytidyl-2C-methyl-D-erythritol synthase; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] id=5083463 bin=GWF1_Burkholderiales_GWF1_66_17 species=gamma proteobacterium HIMB30 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase {ECO:0000313|EMBL:EWS65370.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
uncharacterized MobA-related protein
S13_scaffold_136_curated_15
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11550..12710)
DNA (1161bp) protein (387aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8Q1_9BURK rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_136_curated_16
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12838..14037)
DNA (1200bp) protein (400aa)
Putative hydrolase YxeP {ECO:0000313|EMBL:EWS65372.1}; EC=3.-.-.- {ECO:0000313|EMBL:EWS65372.1};; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
amidohydrolase (EC:3.5.1.32)
Amidohydrolase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8M8_ACIDE
S13_scaffold_136_curated_17
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14067..14699)
DNA (633bp) protein (211aa)
Putative Carbon monoxide dehydrogenase, coxG accessory protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AQD2_AZOBR
putative Carbon monoxide dehydrogenase, coxG accessory protein
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_136_curated_18
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14702..15589)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00037D9414 rbh
beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_136_curated_19
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15586..17967)
DNA (2382bp) protein (794aa)
xanthine dehydrogenase n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00035FACEA rbh
molybdopterin-binding domain of aldehyde dehydrogenase family protein
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_136_curated_20
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17957..18448)
DNA (492bp) protein (164aa)
(2Fe-2S)-binding protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI000372A199
[2Fe-2S] binding domain protein
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_136_curated_21
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18445..19320)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00036E683B
FAD binding domain in molybdopterin dehydrogenase family protein
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_136_curated_22
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19333..20433)
DNA (1101bp) protein (367aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13J88_BURXL rbh
ABC transporter family protein
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_136_curated_23
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20456..21364)
DNA (909bp) protein (303aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13J89_BURXL rbh
Inner membrane ABC transporter permease protein YcjP {ECO:0000313|EMBL:EWS65784.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
binding--dependent transport system inner membrane component family protein
S13_scaffold_136_curated_24
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21393..22373)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00036F6CBE rbh
binding--dependent transport system inner membrane component family protein
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_136_curated_25
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22373..23701)
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI000371C061 rbh
bacterial extracellular solute-binding family protein
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_136_curated_26
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23864..25234)
DNA (1371bp) protein (457aa)
L-serine dehydratase 2 {ECO:0000313|EMBL:EWS65787.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EWS65787.1};; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
L-serine dehydratase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6G4_CALAS rbh
sdaA; L-serine dehydratase rbh
S13_scaffold_136_curated_27
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25250..25561)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. BT03 RepID=J3C586_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EWS65788.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
hypothetical protein
S13_scaffold_136_curated_28
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25695..26402
DNA (708bp) protein (236aa)
TetR family transcriptional regulator n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S1Y3_9BURK
Bacterial regulatory protein, tetR family {ECO:0000313|EMBL:EWS65789.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
bacterial regulatory s, tetR family protein
S13_scaffold_136_curated_29
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26635..27597
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. CF444 RepID=J2TWX8_9BURK
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_136_curated_30
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27600..28664)
DNA (1065bp) protein (355aa)
membrane-bound lytic murein transglycosylase A; K08304 membrane-bound lytic murein transglycosylase A [EC:3.2.1.-] id=5081425 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
membrane-bound lytic murein transglycosylase A rbh
Tax=GWE1_Burkholderiales_65_30_curated
Displaying items 1-30 of 86 in total

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