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S13_scaffold_208_curated

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_208_curated_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22..321)
DNA (300bp) protein (100aa)
Transcriptional regulator, XRE family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CWG6_VARPS
Transcriptional regulator {ECO:0000313|EMBL:GAO21522.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
XRE family transcriptional regulator
S13_scaffold_208_curated_2
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

511..852
DNA (342bp) protein (114aa)
Putative lipoprotein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T889_ACIDE
lipoprotein
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S13_scaffold_208_curated_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

982..1185
DNA (204bp) protein (68aa)
Uncharacterized protein n=2 Tax=Burkholderia multivorans RepID=A9AEA5_BURM1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETU97135.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
S13_scaffold_208_curated_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1241..1744
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T888_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:GAO21515.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
S13_scaffold_208_curated_5
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1868..2155
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T887_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER59312.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
S13_scaffold_208_curated_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2198..3184
DNA (987bp) protein (329aa)
Plasmid replication initiator protein-like protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CWG9_VARPS rbh
Replication protein A {ECO:0000313|EMBL:GAO21513.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Plasmid replication initiator protein-like protein rbh
S13_scaffold_208_curated_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3205..3954
DNA (750bp) protein (250aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CWH0_VARPS rbh
cobyrinic acid ac-diamide synthase rbh
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:ACS18725.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
S13_scaffold_208_curated_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3954..4217
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T884_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:GAO21511.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
S13_scaffold_208_curated_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4214..4744
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CWH2_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS18727.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
S13_scaffold_208_curated_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4741..5274
DNA (534bp) protein (178aa)
Putative conjugal transfer TRAF transmembrane protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CWH3_VARPS
Conjugal transfer TRAF transmembrane protein {ECO:0000313|EMBL:GAO21509.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
conjugal transfer TRAF transmembrane protein
S13_scaffold_208_curated_11
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5626..7572
DNA (1947bp) protein (649aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000369DE09 rbh
hypothetical protein rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S13_scaffold_208_curated_12
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7579..8409)
DNA (831bp) protein (277aa)
bifunctional protein PaaZ/MaoC/YdbN (EC:3.7.1.16 1.17.1.7) rbh
enoyl-CoA hydratase n=1 Tax=Variovorax paradoxus RepID=UPI00037CCEBC rbh
Phenylacetic acid degradation protein paaN {ECO:0000313|EMBL:EJL70206.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
S13_scaffold_208_curated_13
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8953..9816
DNA (864bp) protein (288aa)
Retron-type reverse transcriptase, RNA-directed DNA polymerase (EC:2.7.7.49)
RNA-directed DNA polymerase (Reverse transcriptase) n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1TGN8_9BURK
RNA-directed DNA polymerase (Reverse transcriptase) {ECO:0000313|EMBL:EDT37268.1}; TaxID=396597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria MEX-5.;"
S13_scaffold_208_curated_14
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9962..10513
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida H8234 RepID=R9VBP0_PSEPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN82252.1}; TaxID=1331671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida H8234.;"
S13_scaffold_208_curated_15
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10706..11608)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003754FB2 rbh
D-malate degradation protein R {ECO:0000313|EMBL:EXI89849.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
transcriptional regulator, LysR family rbh
S13_scaffold_208_curated_16
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11727..12356
DNA (630bp) protein (210aa)
NADP oxidoreductase, coenzyme F420-dependent n=1 Tax=Azoarcus sp. KH32C RepID=H0Q0L9_9RHOO rbh
NADP oxidoreductase, coenzyme F420-dependent rbh
NADP oxidoreductase, coenzyme F420-dependent {ECO:0000313|EMBL:BAL22516.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
S13_scaffold_208_curated_17
Marinobacter adhaerens, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12369..12821
DNA (453bp) protein (151aa)
DoxD-like family protein n=1 Tax=Marinobacter adhaerens (strain HP15) RepID=E4PEZ4_MARAH
DoxD-like family protein
DoxD-like family protein {ECO:0000313|EMBL:ADP96699.1}; TaxID=225937 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter adhaerens (strain HP15).;"
S13_scaffold_208_curated_18
Marinobacter lipolyticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12844..13659
DNA (816bp) protein (272aa)
Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B n=1 Tax=Marinobacter lipolyticus SM19 RepID=R8AYG8_9ALTE rbh
Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B {ECO:0000313|EMBL:EON91383.1}; TaxID=1318628 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter lipolyticus SM19.;"
hypothetical protein rbh
S13_scaffold_208_curated_19
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13652..14287
DNA (636bp) protein (212aa)
Phospholipase/Carboxylesterase id=1274576 bin=GWE1_Burkholderiales_65_30 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
phospholipase/carboxylesterase
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_208_curated_20
unknown

Not on your lists

14420..14863
DNA (444bp) protein (148aa)

This feature has no annotations

S13_scaffold_208_curated_21
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14974..15879)
DNA (906bp) protein (302aa)
Transcriptional regulator, LysR family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VQ66_POLNA rbh
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AJW44641.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
S13_scaffold_208_curated_22
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15991..16977
DNA (987bp) protein (329aa)
Oxidoreductase component of 2,4-dinitrotoluene dioxygenase DntAa n=2 Tax=uncultured bacterium RepID=U6C131_9BACT rbh
naphthalene 1,2-dioxygenase
Naphthalene 1,2-dioxygenase {ECO:0000313|EMBL:AJW44642.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
S13_scaffold_208_curated_23
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17022..18284
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DLR5_9BACT rbh
salicylate hydroxylase
Salicylate hydroxylase {ECO:0000313|EMBL:AJW44643.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
S13_scaffold_208_curated_24
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18286..18771
DNA (486bp) protein (162aa)
Salicylate 5-hydroxylase, small oxygenase component n=2 Tax=Burkholderiales RepID=NAGH_RALSP
salicylate hydroxylase
Salicylate hydroxylase {ECO:0000313|EMBL:AJW44644.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
S13_scaffold_208_curated_25
Pseudomonas sp., Proteobacteria, Bacteria

Not on your lists

18782..19096
DNA (315bp) protein (105aa)
Rieske (2Fe-2S) domain protein n=3 Tax=Proteobacteria RepID=A1WAE5_ACISJ
Rieske (2Fe-2S) domain-containing protein
Ferredoxin 2NT {ECO:0000313|EMBL:AAB40382.1}; TaxID=306 species="Bacteria; Proteobacteria.;" source="Pseudomonas sp.;"
S13_scaffold_208_curated_26
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19188..20360
DNA (1173bp) protein (391aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VQ38_POLNA rbh
extracellular ligand-binding receptor rbh
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:ABM37766.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
S13_scaffold_208_curated_27
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20364..21290
DNA (927bp) protein (309aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=2 Tax=Bacteria RepID=A1VQ37_POLNA rbh
inner-membrane translocator rbh
Tax=GWA2_Curvibacter_64_110_curated
S13_scaffold_208_curated_28
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21287..22267
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DFY2_9BACT rbh
inner-membrane translocator rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S13_scaffold_208_curated_29

Not on your lists

22264..23019
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DTH3_9BACT rbh
ABC transporter-like protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD97003.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
S13_scaffold_208_curated_30
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23016..23729
DNA (714bp) protein (238aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VQ34_POLNA rbh
ABC transporter-like protein rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
Displaying items 1-30 of 66 in total

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