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S13_scaffold_825_curated

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_825_curated_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..523)
DNA (522bp) protein (174aa)
ribC, ribF; bifunctional riboflavin kinase/FMN adenylyltransferase (EC:2.7.7.2 2.7.1.26); K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] id=5082373 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
ribC, ribF; bifunctional riboflavin kinase/FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2)
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_825_curated_2
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

677..1234
DNA (558bp) protein (186aa)
HNH endonuclease {ECO:0000313|EMBL:EWS64230.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
HNH endonuclease id=5082372 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
HNH endonuclease rbh
S13_scaffold_825_curated_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1590..2705)
DNA (1116bp) protein (372aa)
acyl-CoA dehydrogenase-like protein; K00257 [EC:1.3.99.-] id=5082371 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
acyl-CoA dehydrogenase-like protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_825_curated_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2716..3897)
DNA (1182bp) protein (394aa)
acyl-CoA dehydrogenase domain-containing protein id=5082370 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
acyl-CoA dehydrogenase domain-containing protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_825_curated_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3976..4704)
DNA (729bp) protein (243aa)
UPF0502 protein Daci_5373 id=1268831 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_825_curated_6
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4773..5312
DNA (540bp) protein (180aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase id=1268830 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_825_curated_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5313..6932)
DNA (1620bp) protein (540aa)
prfC; peptide chain release factor 3; K02837 peptide chain release factor 3 id=5082367 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
peptide chain release factor RF-3
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_825_curated_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6967..8235
DNA (1269bp) protein (423aa)
Fmu (Sun) domain protein id=1268828 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
tRNA and rRNA cytosine-C5-methylase-like protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_825_curated_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8402..9628
DNA (1227bp) protein (409aa)
Fatty acid desaturase id=1268827 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
fatty acid desaturase rbh
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_825_curated_10
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9812..9982)
DNA (171bp) protein (57aa)
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 id=5082364 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rpmG; 50S ribosomal protein L33
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_825_curated_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9995..10162)
DNA (168bp) protein (56aa)
50S ribosomal protein L28 id=1268825 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rpmB; 50S ribosomal protein L28
Tax=GWE1_Burkholderiales_65_30_curated
Displaying 11 items

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