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S13_scaffold_91_curated

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Displaying items 1-30 of 123 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_91_curated_1
Gordonia soli, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..975)
DNA (975bp) protein (325aa)
Putative cytochrome P450 n=1 Tax=Gordonia soli NBRC 108243 RepID=M0QJF4_9ACTO
cytochrome P450
Putative cytochrome P450 {ECO:0000313|EMBL:GAC68693.1}; TaxID=1223545 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia soli NBRC 108243.;"
S13_scaffold_91_curated_2
unknown

Not on your lists

1383..1688
DNA (306bp) protein (102aa)

This feature has no annotations

S13_scaffold_91_curated_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2095..2700)
DNA (606bp) protein (202aa)
Cold shock protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I329_9RHIZ
Cold shock protein {ECO:0000313|EMBL:EHK52616.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
cold shock protein
S13_scaffold_91_curated_4
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3079..3390)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00036C7414
Uncharacterized protein {ECO:0000313|EMBL:EXL01493.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
hypothetical protein
S13_scaffold_91_curated_5
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3437..4756)
DNA (1320bp) protein (440aa)
sulfite oxidase (EC:1.8.3.1) rbh
Sulfite oxidase n=2 Tax=Oligotropha carboxidovorans RepID=B6JFX8_OLICO rbh
Molybdopterin containing oxidoreductase {ECO:0000313|EMBL:EXL01494.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
S13_scaffold_91_curated_6

Not on your lists

comp(4890..5702)
DNA (813bp) protein (271aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN51731.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S13_scaffold_91_curated_7

Not on your lists

comp(5699..6232)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031F12A5
Uncharacterized protein {ECO:0000313|EMBL:KKN51732.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RNA polymerase sigma factor, sigma-70 family
S13_scaffold_91_curated_8
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6485..6802)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U3Q0_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EGP58461.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
hypothetical protein
S13_scaffold_91_curated_9
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6905..7627)
DNA (723bp) protein (241aa)
oxidoreductase n=1 Tax=Rhizobium meliloti RepID=UPI00035D3F2D rbh
Oxidoreductase {ECO:0000313|EMBL:ETR77585.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
oxidoreductase short-chain dehydrogenase/reductase family protein YdfG
S13_scaffold_91_curated_10
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7725..8612
DNA (888bp) protein (296aa)
Transcriptional regulator, LysR family n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U3P8_RHIRD rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:ETR77584.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
LysR family transcriptional regulator rbh
S13_scaffold_91_curated_11

Not on your lists

8756..10111
DNA (1356bp) protein (452aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=uncultured bacterium RepID=L7Y0I9_9BACT rbh
rimO; 30S ribosomal protein S12 methylthiotransferase rbh
S13_scaffold_91_curated_12
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10211..11323
DNA (1113bp) protein (371aa)
UPI0003CF23E6 related cluster n=1 Tax=unknown RepID=UPI0003CF23E6 rbh
Acyltransferase {ECO:0000313|EMBL:ESY74856.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
acyltransferase 3 rbh
S13_scaffold_91_curated_13
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11331..11960)
DNA (630bp) protein (210aa)
Glutathione S-transferase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BTB9_9RHIZ
Glutathione S-transferase {ECO:0000313|EMBL:EIM72821.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
glutathione S-transferase
S13_scaffold_91_curated_14
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12042..12602)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI0003696182
PilT protein domain-containing protein
PilT protein domain protein {ECO:0000313|EMBL:CCJ05513.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
S13_scaffold_91_curated_15
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12553..12789)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI0003723CBF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCJ05512.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
S13_scaffold_91_curated_16
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12874..13950)
DNA (1077bp) protein (359aa)
Basic membrane lipoprotein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSQ3_9RHIZ rbh
Basic membrane lipoprotein {ECO:0000313|EMBL:EHK56241.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
basic membrane lipoprotein rbh
S13_scaffold_91_curated_17
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14002..14916)
DNA (915bp) protein (305aa)
Inner-membrane translocator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSQ4_9RHIZ rbh
Inner-membrane translocator {ECO:0000313|EMBL:EHK56242.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
inner-membrane translocator rbh
S13_scaffold_91_curated_18
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14909..16000)
DNA (1092bp) protein (364aa)
sugar ABC transporter permease n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E9C064 rbh
inner-membrane translocator rbh
Nucleoside ABC transporter membrane protein {ECO:0000313|EMBL:ABG63087.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
S13_scaffold_91_curated_19
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16002..17576)
DNA (1575bp) protein (525aa)
ABC transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSQ6_9RHIZ rbh
ABC transporter {ECO:0000313|EMBL:EHK56244.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC transporter rbh
S13_scaffold_91_curated_20
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17688..18665)
DNA (978bp) protein (326aa)
Quinone oxidoreductase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98MN4_RHILO rbh
quinone oxidoreductase rbh
Quinone oxidoreductase {ECO:0000313|EMBL:BAB48079.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
S13_scaffold_91_curated_21
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18667..19434)
DNA (768bp) protein (256aa)
Phosphatidylcholine synthase {ECO:0000256|PIRNR:PIRNR000851}; Short=PC synthase {ECO:0000256|PIRNR:PIRNR000851};; Short=PCS {ECO:0000256|PIRNR:PIRNR000851};; EC=2.7.8.24 {ECO:0000256|PIRNR:PIRNR000851};; CDP-diglyceride-choline O-phosphatidyltransferase {ECO:0000256|PIRNR:PIRNR000851}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
phosphatidylcholine synthase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00036CEFE5 rbh
phosphatidylserine synthase rbh
S13_scaffold_91_curated_22
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19431..20045)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T8T9_MESCW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADV12987.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S13_scaffold_91_curated_23
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20073..20981)
DNA (909bp) protein (303aa)
UPI0003CE4CB2 related cluster n=1 Tax=unknown RepID=UPI0003CE4CB2 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESW91315.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein rbh
S13_scaffold_91_curated_24
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21067..22269
DNA (1203bp) protein (401aa)
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YBT7_MESOW rbh
2-octaprenyl-6-methoxyphenyl hydroxylase {ECO:0000313|EMBL:CDX16483.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase rbh
S13_scaffold_91_curated_25
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22240..23208)
DNA (969bp) protein (323aa)
Auxin efflux carrier n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSR0_9RHIZ rbh
Auxin efflux carrier {ECO:0000313|EMBL:EHK56248.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
auxin efflux carrier rbh
S13_scaffold_91_curated_26
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23331..23663
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSR1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX30887.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hemimethylated DNA binding protein
S13_scaffold_91_curated_27
unknown

Not on your lists

24001..24414
DNA (414bp) protein (138aa)

This feature has no annotations

S13_scaffold_91_curated_28
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24457..25632)
DNA (1176bp) protein (392aa)
lipid-A-disaccharide synthase (EC:2.4.1.182) rbh
UPI0003CE6661 related cluster n=1 Tax=unknown RepID=UPI0003CE6661 rbh
Lipid-A-disaccharide synthase {ECO:0000313|EMBL:ESX70800.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;"
S13_scaffold_91_curated_29
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25629..26516)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ESM7_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX17994.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein rbh
S13_scaffold_91_curated_30
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26503..27348)
DNA (846bp) protein (282aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387};; EC=2.3.1.129 {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00001267};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129) rbh
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YHF7_9RHIZ rbh
Displaying items 1-30 of 123 in total

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