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S13_scaffold_339_curated

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_339_curated_1
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

362..820
DNA (459bp) protein (153aa)
UPI0003CE97F7 related cluster n=1 Tax=unknown RepID=UPI0003CE97F7
UPF0178 protein X772_25575 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
S13_scaffold_339_curated_2
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

944..1534
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVP5_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK55206.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
S13_scaffold_339_curated_3
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1675..2520
DNA (846bp) protein (282aa)
S-formylglutathione hydrolase (EC:3.1.2.12 3.1.1.1) rbh
S-formylglutathione hydrolase n=1 Tax=Nitratireductor indicus C115 RepID=K2NTD8_9RHIZ rbh
S-formylglutathione hydrolase {ECO:0000313|EMBL:EKF41049.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
S13_scaffold_339_curated_4
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2620..3003
DNA (384bp) protein (128aa)
Transcription regulator n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MKW7_9RHIZ
Transcription regulator {ECO:0000313|EMBL:EKF17877.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
helix-turn-helix domain-containing protein
S13_scaffold_339_curated_5
Mesorhizobium sp. LNJC399B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3010..4014)
DNA (1005bp) protein (335aa)
UPI0003CE0054 related cluster n=1 Tax=unknown RepID=UPI0003CE0054 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY08449.1}; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC399B00.;"
hypothetical protein rbh
S13_scaffold_339_curated_6
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4173..5324)
DNA (1152bp) protein (384aa)
UPI0003CEBFB5 related cluster n=1 Tax=unknown RepID=UPI0003CEBFB5
Diguanylate cyclase {ECO:0000313|EMBL:CDX26135.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
diguanylate cyclase
S13_scaffold_339_curated_7
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5766..6869
DNA (1104bp) protein (368aa)
Aminomethyltransferase {ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981};; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
UPI0003CEE594 related cluster n=1 Tax=unknown RepID=UPI0003CEE594 rbh
gcvT; glycine cleavage system aminomethyltransferase T rbh
S13_scaffold_339_curated_8
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6875..7243
DNA (369bp) protein (123aa)
UPI0003CE68F3 related cluster n=1 Tax=unknown RepID=UPI0003CE68F3
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
glycine cleavage system protein H
S13_scaffold_339_curated_9
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7254..10067
DNA (2814bp) protein (938aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
glycine dehydrogenase (EC:1.4.4.2) rbh
Glycine dehydrogenase (decarboxylating) n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LJF2_9RHIZ rbh
S13_scaffold_339_curated_10
unknown

Not on your lists

10135..10560
DNA (426bp) protein (142aa)

This feature has no annotations

S13_scaffold_339_curated_11
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10557..11015
DNA (459bp) protein (153aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1392000 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium avium 10-5581.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003094793
PilT protein-like protein
S13_scaffold_339_curated_12
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11164..13230
DNA (2067bp) protein (689aa)
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
DNA topoisomerase 4 subunit B n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVN2_9RHIZ rbh
DNA topoisomerase IV subunit B rbh
S13_scaffold_339_curated_13
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13323..14063
DNA (741bp) protein (247aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVN1_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK55248.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein rbh
S13_scaffold_339_curated_14
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14140..14385
DNA (246bp) protein (82aa)
Tat pathway signal sequence domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RR60_9PROT
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EFH10208.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein
S13_scaffold_339_curated_15
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14513..15640)
DNA (1128bp) protein (376aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y842_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHH12080.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein rbh
S13_scaffold_339_curated_16
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15780..16232
DNA (453bp) protein (151aa)
MaoC-like dehydratase n=1 Tax=Nitratireductor indicus C115 RepID=K2N0L3_9RHIZ
MaoC-like dehydratase {ECO:0000313|EMBL:KFB10241.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
MaoC-like dehydratase
S13_scaffold_339_curated_17
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16235..17116
DNA (882bp) protein (294aa)
Citryl-CoA lyase (EC:4.1.3.34) rbh
Citryl-CoA lyase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y844_9RHIZ rbh
Citryl-CoA lyase {ECO:0000313|EMBL:CDX28062.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
S13_scaffold_339_curated_18
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17127..17711)
DNA (585bp) protein (195aa)
Nitroreductase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVM5_9RHIZ rbh
Nitroreductase {ECO:0000313|EMBL:EHK55242.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
nitroreductase
S13_scaffold_339_curated_19
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17826..18809
DNA (984bp) protein (328aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HWF5_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK54998.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein rbh
S13_scaffold_339_curated_20
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18904..20895)
DNA (1992bp) protein (664aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
Threonine--tRNA ligase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HWF6_9RHIZ rbh
threonyl-tRNA synthetase rbh
S13_scaffold_339_curated_21
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21010..21351)
DNA (342bp) protein (114aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HWF7_9RHIZ
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
S13_scaffold_339_curated_22
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21362..21724)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HWF8_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK55001.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
uncharacterized protein
S13_scaffold_339_curated_23
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21721..22014)
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HWF9_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK55002.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
DNA polymerase beta-like protein
S13_scaffold_339_curated_24
Mesorhizobium sp. L2C066B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22026..22472)
DNA (447bp) protein (149aa)
UPI0003CFD0D7 related cluster n=1 Tax=unknown RepID=UPI0003CFD0D7
Nitrogen-fixing protein NifU {ECO:0000313|EMBL:ESZ42677.1}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C066B000.;"
nitrogen-fixing NifU domain-containing protein
S13_scaffold_339_curated_25
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22717..23352
DNA (636bp) protein (212aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
GTP cyclohydrolase I (EC:3.5.4.16) rbh
UPI0003CF9D2C related cluster n=1 Tax=unknown RepID=UPI0003CF9D2C rbh
S13_scaffold_339_curated_26
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23386..23844
DNA (459bp) protein (153aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
phosphoribosyl-AMP cyclohydrolase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003780227
S13_scaffold_339_curated_27
Mesorhizobium sp. LNJC372A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23929..24900
DNA (972bp) protein (324aa)
UPI0003CE178A related cluster n=1 Tax=unknown RepID=UPI0003CE178A rbh
Patatin {ECO:0000313|EMBL:ESY60144.1}; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC372A00.;"
putative esterase of the alpha-beta hydrolase superfamily rbh
S13_scaffold_339_curated_28
unknown

Not on your lists

25071..26372
DNA (1302bp) protein (434aa)

This feature has no annotations

S13_scaffold_339_curated_29
unknown

Not on your lists

26350..26505
DNA (156bp) protein (52aa)

This feature has no annotations

S13_scaffold_339_curated_30
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26445..28223)
DNA (1779bp) protein (593aa)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y4S0_MESOW rbh
single-stranded-DNA-specific exonuclease RecJ rbh
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:AEH88473.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
Displaying items 1-30 of 40 in total

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