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S13_scaffold_221_curated

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_221_curated_1
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..954
DNA (954bp) protein (318aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MDS2_9RHIZ rbh
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase rbh
S13_scaffold_221_curated_2
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

985..1281
DNA (297bp) protein (99aa)
YciI-like protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLF4_9RHIZ
YciI-like protein {ECO:0000313|EMBL:EHK58483.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
S13_scaffold_221_curated_3
Brucella suis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1281..1697
DNA (417bp) protein (139aa)
Uncharacterized protein n=254 Tax=Brucella RepID=F2GT76_BRUM5
hypothetical protein
Ubiquinol-cytochrome C reductase {ECO:0000313|EMBL:AJM85554.1}; TaxID=29461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella suis.;"
S13_scaffold_221_curated_4
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1703..2359
DNA (657bp) protein (219aa)
Putative methyltransferase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KF01_MESAW rbh
Ribosomal L11 methyltransferase {ECO:0000313|EMBL:CDX30611.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
putative methyltransferase rbh
S13_scaffold_221_curated_5
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2472..3074)
DNA (603bp) protein (201aa)
UPI0003CF4EF4 related cluster n=1 Tax=unknown RepID=UPI0003CF4EF4
Uncharacterized protein {ECO:0000313|EMBL:ESY98175.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
ErfK/YbiS/YcfS/YnhG family protein
S13_scaffold_221_curated_6
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3148..3831
DNA (684bp) protein (228aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KGC8_MESAW rbh
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain rbh
Transcriptional regulator {ECO:0000313|EMBL:ESY98174.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
S13_scaffold_221_curated_7
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3880..4332
DNA (453bp) protein (151aa)
UPI0003CF0D60 related cluster n=1 Tax=unknown RepID=UPI0003CF0D60
cAMP-dependent protein kinase {ECO:0000313|EMBL:ESY82579.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
hypothetical protein
S13_scaffold_221_curated_8
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4365..5171)
DNA (807bp) protein (269aa)
exodeoxyribonuclease III n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003070667 rbh
Exodeoxyribonuclease III {ECO:0000313|EMBL:EXL10303.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
exodeoxyribonuclease III Xth rbh
S13_scaffold_221_curated_9
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5302..5979)
DNA (678bp) protein (226aa)
Outer membrane lipoprotein carrier protein LolA n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MEF7_9RHIZ
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein
S13_scaffold_221_curated_10
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6056..8671)
DNA (2616bp) protein (872aa)
DNA translocase ftsK n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F3C3_9RHIZ rbh
DNA translocase ftsK {ECO:0000313|EMBL:CCV10678.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
DNA translocase FtsK rbh
S13_scaffold_221_curated_11
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8872..10260)
DNA (1389bp) protein (463aa)
Ammonium transporter n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MPA3_9RHIZ rbh
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
ammonium transporter rbh
S13_scaffold_221_curated_12
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10289..10627)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II 1 n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7F8N3_9RHIZ
nitrogen regulatory protein P-II
Regulatory protein (P-II 2) for nitrogen assimilation, regulates GlnL (NRII), GlnE (ATase), and AmtB (Ammonium transporter) {ECO:0000313|EMBL:CDX46427.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
S13_scaffold_221_curated_13
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10857..11720)
DNA (864bp) protein (288aa)
UPI0003CF0FE9 related cluster n=1 Tax=unknown RepID=UPI0003CF0FE9 rbh
Acyl-CoA thioesterase {ECO:0000313|EMBL:ESY78365.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
acyl-CoA thioesterase rbh
S13_scaffold_221_curated_14
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11840..13072
DNA (1233bp) protein (411aa)
2-octaprenyl-6-methoxyphenyl hydroxylase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00038140BB rbh
2-octaprenyl-6-methoxyphenyl hydroxylase {ECO:0000313|EMBL:KFB08719.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
2-octaprenyl-6-methoxyphenyl hydroxylase rbh
S13_scaffold_221_curated_15
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13199..13624
DNA (426bp) protein (142aa)
Osmotically inducible protein C, putative ATP/GTP binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLA7_9RHIZ
Osmotically inducible, stress-inducible membrane protein {ECO:0000313|EMBL:CDX41992.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
osmotically inducible protein C, ATP/GTP binding protein
S13_scaffold_221_curated_16
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13772..14893
DNA (1122bp) protein (374aa)
leucine dehydrogenase (EC:1.4.1.9) rbh
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036690B0 rbh
Leucine dehydrogenase {ECO:0000313|EMBL:EKF19122.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
S13_scaffold_221_curated_17
unknown

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comp(14982..15395)
DNA (414bp) protein (138aa)

This feature has no annotations

S13_scaffold_221_curated_18

Not on your lists

15704..15862
DNA (159bp) protein (53aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium HF130_12L15 RepID=E0XPN8_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ADI16379.1}; TaxID=710815 species="Bacteria; environmental samples.;" source="uncultured bacterium HF130_12L15.;"
Protein of unknown function (DUF3309)
S13_scaffold_221_curated_19

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comp(15924..16883)
DNA (960bp) protein (320aa)
Nucleoside-diphosphate-sugar epimerases n=1 Tax=uncultured bacterium HF130_12L15 RepID=E0XPN9_9BACT rbh
Nucleoside-diphosphate-sugar epimerases {ECO:0000313|EMBL:ADI16380.1}; TaxID=710815 species="Bacteria; environmental samples.;" source="uncultured bacterium HF130_12L15.;"
hypothetical protein
S13_scaffold_221_curated_20

Not on your lists

16983..17870
DNA (888bp) protein (296aa)
Transcriptional regulator n=1 Tax=uncultured bacterium HF130_12L15 RepID=E0XPP0_9BACT rbh
Transcriptional regulator {ECO:0000313|EMBL:ADI16381.1}; TaxID=710815 species="Bacteria; environmental samples.;" source="uncultured bacterium HF130_12L15.;"
transcriptional regulator rbh
S13_scaffold_221_curated_21

Not on your lists

comp(17855..19054)
DNA (1200bp) protein (400aa)
Permeases of the major facilitator superfamily n=1 Tax=uncultured bacterium HF130_12L15 RepID=E0XPP1_9BACT rbh
Permeases of the major facilitator superfamily {ECO:0000313|EMBL:ADI16382.1}; TaxID=710815 species="Bacteria; environmental samples.;" source="uncultured bacterium HF130_12L15.;"
fucose permease rbh
S13_scaffold_221_curated_22

Not on your lists

comp(19159..20385)
DNA (1227bp) protein (409aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=710815 species="Bacteria; environmental samples.;" source="uncultured bacterium HF130_12L15.;"
argininosuccinate synthase (EC:6.3.4.5) rbh
Argininosuccinate synthase n=1 Tax=uncultured bacterium HF130_12L15 RepID=E0XPP2_9BACT rbh
S13_scaffold_221_curated_23
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20581..21570
DNA (990bp) protein (330aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HL32_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK58516.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
S13_scaffold_221_curated_24
unknown

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comp(21636..21806)
DNA (171bp) protein (57aa)

This feature has no annotations

S13_scaffold_221_curated_25
Loktanella hongkongensis, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21824..23209)
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Loktanella hongkongensis RepID=UPI00037EF217 rbh
Amidase {ECO:0000313|EMBL:EYD72696.1}; TaxID=1122180 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella hongkongensis DSM 17492.;"
Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A
S13_scaffold_221_curated_26
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23199..24617)
DNA (1419bp) protein (473aa)
TRAP C4-dicarboxylate transport system permease DctM subunit n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4T5_POLGS rbh
TRAP C4-dicarboxylate transporter permease DctM rbh
TRAP C4-dicarboxylate transport system permease DctM subunit {ECO:0000313|EMBL:ADZ69027.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
S13_scaffold_221_curated_27
Thalassospira xiamenensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(24666..25238)
DNA (573bp) protein (191aa)
Tripartite ATP-independent periplasmic transporter, DctQ component n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2M950_9PROT rbh
Tripartite ATP-independent periplasmic transporter, DctQ component
Tripartite ATP-independent periplasmic transporter, DctQ component {ECO:0000313|EMBL:AJD50633.1}; TaxID=1123366 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira xiamenensis M-5 = DSM 17429.;"
S13_scaffold_221_curated_28
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25315..26442)
DNA (1128bp) protein (376aa)
TRAP-T family transporter, periplasmic binding protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4T3_POLGS rbh
TRAP-T family transporter periplasmic binding protein rbh
TRAP-T family transporter, periplasmic binding protein {ECO:0000313|EMBL:ADZ69025.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
S13_scaffold_221_curated_29

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26687..27328
DNA (642bp) protein (214aa)
Putative threonine efflux protein n=1 Tax=uncultured bacterium HF130_12L15 RepID=E0XPP7_9BACT rbh
Putative threonine efflux protein {ECO:0000313|EMBL:ADI16388.1}; TaxID=710815 species="Bacteria; environmental samples.;" source="uncultured bacterium HF130_12L15.;"
lysine exporter protein LysE/YggA rbh
S13_scaffold_221_curated_30
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27300..27773)
DNA (474bp) protein (158aa)
UPI0003D007F4 related cluster n=1 Tax=unknown RepID=UPI0003D007F4
Uncharacterized protein {ECO:0000313|EMBL:ESZ06243.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
Displaying items 1-30 of 64 in total

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