ggKbase home page

S13_scaffold_396_curated

Search features with annotation key words

Displaying items 1-30 of 40 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_396_curated_1
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..420
DNA (420bp) protein (140aa)
Peptide-binding protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FMB7_9RHIZ
Peptide-binding protein {ECO:0000313|EMBL:ESX78806.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
SH3 type 3 domain-containing protein
S13_scaffold_396_curated_2
Mesorhizobium sp. L103C565B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

584..3028
DNA (2445bp) protein (815aa)
UPI0003D06D7C related cluster n=1 Tax=unknown RepID=UPI0003D06D7C rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ49969.1}; TaxID=1287094 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C565B0.;"
peptidase C14 caspase catalytic subunit p20 rbh
S13_scaffold_396_curated_3
Arthrospira platensis, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3145..4077)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000376559A
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAI91928.1}; TaxID=696747 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira platensis (strain NIES-39 / IAM M-135) (Spirulina; platensis).;"
S13_scaffold_396_curated_4
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4351..7848
DNA (3498bp) protein (1166aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
UPI0003D057F5 related cluster n=1 Tax=unknown RepID=UPI0003D057F5 rbh
carbamoyl-phosphate synthase, large subunit rbh
S13_scaffold_396_curated_5
unknown

Not on your lists

comp(7921..9009)
DNA (1089bp) protein (363aa)

This feature has no annotations

S13_scaffold_396_curated_6
unknown

Not on your lists

comp(9022..10284)
DNA (1263bp) protein (421aa)

This feature has no annotations

S13_scaffold_396_curated_7
unknown

Not on your lists

10458..10793
DNA (336bp) protein (112aa)

This feature has no annotations

S13_scaffold_396_curated_8
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10999..12021
DNA (1023bp) protein (341aa)
Methionine synthase I {ECO:0000313|EMBL:EHK56206.1}; EC=2.1.1.13 {ECO:0000313|EMBL:EHK56206.1};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Methionine synthase I n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSY0_9RHIZ rbh
cobalamin-dependent methionine synthase I rbh
S13_scaffold_396_curated_9
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12035..12901)
DNA (867bp) protein (289aa)
UPI0003CF6414 related cluster n=1 Tax=unknown RepID=UPI0003CF6414 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESW86189.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein rbh
S13_scaffold_396_curated_10
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12989..15550)
DNA (2562bp) protein (854aa)
UPI0003D030B8 related cluster n=1 Tax=unknown RepID=UPI0003D030B8 rbh
Dehydrogenase {ECO:0000313|EMBL:ESZ20483.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
glycine cleavage T protein (aminomethyl transferase) rbh
S13_scaffold_396_curated_11
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15770..16888
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037BBA71 rbh
Uncharacterized protein {ECO:0000313|EMBL:EAS49002.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
hypothetical protein
S13_scaffold_396_curated_12
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16923..17819
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000361D2D3 rbh
Uncharacterized protein {ECO:0000313|EMBL:EAS49003.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
Hypothetical protein
S13_scaffold_396_curated_13
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18097..19287)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3JAV8_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KFB09779.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
hypothetical protein
S13_scaffold_396_curated_14
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19325..20815)
DNA (1491bp) protein (497aa)
Class III aminotransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT15_9RHIZ rbh
Class III aminotransferase {ECO:0000313|EMBL:EHK56115.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
aminotransferase rbh
S13_scaffold_396_curated_15
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20812..21822)
DNA (1011bp) protein (337aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT16_9RHIZ rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EHK56116.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
NDP-glucose 4,6-dehydratase rbh
S13_scaffold_396_curated_16
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21819..22253)
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT17_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56117.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
S13_scaffold_396_curated_17
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22366..23706)
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EA6601 rbh
FAD-linked oxidase {ECO:0000313|EMBL:ESZ58161.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
FAD linked oxidase domain-containing protein rbh
S13_scaffold_396_curated_18
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23706..25145)
DNA (1440bp) protein (480aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT19_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56119.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
UbiA prenyltransferase rbh
S13_scaffold_396_curated_19
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25361..25624)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NXY5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF44060.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
S13_scaffold_396_curated_20
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25734..28277)
DNA (2544bp) protein (848aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT21_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56121.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
mechanosensitive ion channel MscS rbh
S13_scaffold_396_curated_21
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28446..29708
DNA (1263bp) protein (421aa)
UPI0003D066C7 related cluster n=1 Tax=unknown RepID=UPI0003D066C7 rbh
Sarcosine oxidase subunit beta {ECO:0000313|EMBL:ESZ25240.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
sarcosine oxidase subunit beta rbh
S13_scaffold_396_curated_22
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29762..30031
DNA (270bp) protein (90aa)
sarcosine oxidase subunit delta n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E2161A
Sarcosine oxidase subunit delta {ECO:0000313|EMBL:EIM76257.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
sarcosine oxidase, delta subunit family, heterotetrameric form
S13_scaffold_396_curated_23
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31194..33047
DNA (1854bp) protein (618aa)
Sarcosine oxidase subunit alpha n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LT08_9RHIZ rbh
Sarcosine oxidase subunit alpha {ECO:0000313|EMBL:EKF20919.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
sarcosine oxidase, alpha subunit family, heterotetrameric form rbh
S13_scaffold_396_curated_24
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33040..33627
DNA (588bp) protein (196aa)
Sarcosine oxidase subunit gamma family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT25_9RHIZ
Sarcosine oxidase subunit gamma family protein {ECO:0000313|EMBL:EHK56125.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
sarcosine oxidase subunit gamma
S13_scaffold_396_curated_25
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33728..34378)
DNA (651bp) protein (217aa)
Probable short-chain dehydrogenase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98ML3_RHILO
short-chain dehydrogenase
Probable short-chain dehydrogenase {ECO:0000313|EMBL:BAB48100.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
S13_scaffold_396_curated_26
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34482..35114
DNA (633bp) protein (211aa)
Transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVE9_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EHK55297.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transcriptional regulator
S13_scaffold_396_curated_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35156..35986)
DNA (831bp) protein (277aa)
Nitroreductase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT28_9RHIZ rbh
Nitroreductase {ECO:0000313|EMBL:EHK56128.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
nitroreductase rbh
S13_scaffold_396_curated_28
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36054..38507
DNA (2454bp) protein (818aa)
Dimethylglycine dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT30_9RHIZ rbh
Dimethylglycine dehydrogenase {ECO:0000313|EMBL:EHK56130.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
dimethylglycine dehydrogenase rbh
S13_scaffold_396_curated_29
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38660..39880
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FLA1_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV14114.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein rbh
S13_scaffold_396_curated_30
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39885..41474)
DNA (1590bp) protein (530aa)
YjeF-like protein, hydroxyethylthiazole kinase-related protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KRB6_MESAW rbh
Uncharacterized protein {ECO:0000313|EMBL:EZQ16138.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
yjeF-like protein, hydroxyethylthiazole kinase-related protein rbh
Displaying items 1-30 of 40 in total

View Taxonomy