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S13_scaffold_393_curated

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_393_curated_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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231..1871
DNA (1641bp) protein (547aa)
acyl-CoA synthetase (EC:2.3.1.86) rbh
Acyl-CoA synthetase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLH8_9RHIZ rbh
Acyl-CoA synthetase {ECO:0000313|EMBL:EHK58376.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
S13_scaffold_393_curated_2
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2041..2448
DNA (408bp) protein (136aa)
Mll3904 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98F70_RHILO
hypothetical protein
Mll3904 protein {ECO:0000313|EMBL:BAB50697.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
S13_scaffold_393_curated_3
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2797..3324
DNA (528bp) protein (176aa)
Mll3903 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98F71_RHILO
hypothetical protein
Mll3903 protein {ECO:0000313|EMBL:BAB50696.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
S13_scaffold_393_curated_4
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3331..4113)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N3P4_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EKF18898.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
Protein containing DUF81
S13_scaffold_393_curated_5
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4274..4792
DNA (519bp) protein (173aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
ruvC; Holliday junction resolvase (EC:3.1.22.4)
UPI0003CFDC19 related cluster n=1 Tax=unknown RepID=UPI0003CFDC19
S13_scaffold_393_curated_6
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5029..5649
DNA (621bp) protein (207aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLH2_9RHIZ rbh
ruvA; Holliday junction DNA helicase RuvA rbh
S13_scaffold_393_curated_7
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5710..5988
DNA (279bp) protein (93aa)
Transcriptional regulator, AbrB family protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D138_9RHIZ
Regulator of stationary/sporulation gene expression {ECO:0000313|EMBL:EDQ34376.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
AbrB family transcriptional regulator
S13_scaffold_393_curated_8
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5985..6395
DNA (411bp) protein (137aa)
UPI0003CF12F2 related cluster n=1 Tax=unknown RepID=UPI0003CF12F2
Twitching motility protein PilT {ECO:0000313|EMBL:ESY74034.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
PilT domain-containing protein
S13_scaffold_393_curated_9
unknown

Not on your lists

6395..6556
DNA (162bp) protein (54aa)

This feature has no annotations

S13_scaffold_393_curated_10
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6553..7590
DNA (1038bp) protein (346aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y424_9RHIZ rbh
Holliday junction DNA helicase RuvB rbh
S13_scaffold_393_curated_11
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7718..9340
DNA (1623bp) protein (541aa)
ATP-binding protein, ABC-type transporter n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YGS8_MOBAS rbh
ATP-binding protein, ABC-type transporter {ECO:0000313|EMBL:EAS49147.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
ATPase component of ABC transporters with duplicated ATPase domain rbh
S13_scaffold_393_curated_12
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9477..10727)
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000360E43F rbh
Glycoside hydrolase family 5 {ECO:0000313|EMBL:CDX42663.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
endoglucanase rbh
S13_scaffold_393_curated_13
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10789..11250
DNA (462bp) protein (154aa)
Tol-pal system-associated acyl-CoA thioesterase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TN06_MESCW
tol-pal system-associated acyl-CoA thioesterase
Tol-pal system-associated acyl-CoA thioesterase {ECO:0000313|EMBL:ADV10449.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S13_scaffold_393_curated_14
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11586..12425
DNA (840bp) protein (280aa)
ATPase associated with various cellular activities AAA_5 n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TM26_MESCW rbh
ATPase AAA rbh
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:ADV10411.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S13_scaffold_393_curated_15
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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comp(12451..13020)
DNA (570bp) protein (190aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CS27_VARPS id=5223505 bin=16ft_combo_ws3_JS1 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
polyketide cyclase
Tax=RBG_16_Armatimonadetes_67_12_curated
S13_scaffold_393_curated_16
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(13017..13358)
DNA (342bp) protein (114aa)
ArsR family transcriptional regulator n=1 Tax=Salinispora pacifica RepID=UPI00037909C6
ArsR family transcriptional regulator
Tax=RBG_13_Acidobacteria_68_16_curated
S13_scaffold_393_curated_17
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13521..13967
DNA (447bp) protein (149aa)
GCN5 family N-acetyltransferase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FHF2_9RHIZ
GCN5 family N-acetyltransferase {ECO:0000313|EMBL:ESX76701.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
GCN5-like N-acetyltransferase
S13_scaffold_393_curated_18
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13945..15003)
DNA (1059bp) protein (353aa)
cell-wall lytic enzyme n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030F97C9 rbh
glycoside hydrolase rbh
Glycoside hydrolase, family 25 {ECO:0000313|EMBL:ABG62035.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
S13_scaffold_393_curated_19
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15177..16367
DNA (1191bp) protein (397aa)
VWA containing CoxE family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HM06_9RHIZ rbh
VWA containing CoxE family protein {ECO:0000313|EMBL:EHK58198.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein rbh
S13_scaffold_393_curated_20
unknown

Not on your lists

16377..16703
DNA (327bp) protein (109aa)

This feature has no annotations

S13_scaffold_393_curated_21
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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17133..17534
DNA (402bp) protein (134aa)
Methionine sulfoxide reductase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FHI9_9RHIZ
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:AID33070.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
methionine-R-sulfoxide reductase
S13_scaffold_393_curated_22
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17631..18674
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0KC32_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJC75099.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
hypothetical protein
S13_scaffold_393_curated_23
Celeribacter baekdonensis, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18687..19457)
DNA (771bp) protein (257aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JHH7_9RHOB rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EKE74608.1}; TaxID=1208323 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter baekdonensis B30.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
S13_scaffold_393_curated_24
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19648..19884)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9QU50_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KJE35044.1}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira sp. HJ.;"
Protein of unknown function (DUF2798)
S13_scaffold_393_curated_25
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19895..20500)
DNA (606bp) protein (202aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33) rbh
UPI0003CEB372 related cluster n=1 Tax=unknown RepID=UPI0003CEB372 rbh
S13_scaffold_393_curated_26
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20626..21750
DNA (1125bp) protein (375aa)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Rhizobium sp. AP16 RepID=J2WXH4_9RHIZ rbh
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:EJK87868.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
aspB1; transaminase rbh
S13_scaffold_393_curated_27
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21824..22246)
DNA (423bp) protein (141aa)
UPI0003CF0B71 related cluster n=1 Tax=unknown RepID=UPI0003CF0B71
Zn-dependent protease {ECO:0000313|EMBL:ESW68415.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
S13_scaffold_393_curated_28
Mesorhizobium sp. LSHC426A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22453..23394
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000362F198 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESX50995.1}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC426A00.;"
hypothetical protein rbh
S13_scaffold_393_curated_29
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23414..24844
DNA (1431bp) protein (477aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YB83_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHH11066.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein rbh
S13_scaffold_393_curated_30
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24841..28194
DNA (3354bp) protein (1118aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
DNA polymerase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037FF3CD rbh
DNA-directed DNA polymerase III PolC rbh
Displaying items 1-30 of 35 in total

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