ggKbase home page

S13_scaffold_688_curated

Search features with annotation key words

Displaying 18 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_688_curated_1
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

129..1241
DNA (1113bp) protein (371aa)
Integrase n=2 Tax=Pseudomonas aeruginosa RepID=U8RHL1_PSEAI rbh
integrase
Integrase {ECO:0000313|EMBL:KIZ33048.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
S13_scaffold_688_curated_2
Pseudomonas sp. BAY1663, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1238..2302
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8WJ73_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:EXF45878.1}; TaxID=1439940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. BAY1663.;"
hypothetical protein
S13_scaffold_688_curated_3
Pseudomonas frederiksbergensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2650..3159
DNA (510bp) protein (170aa)
RadC-like protein n=1 Tax=Pseudomonas aeruginosa JJ692 RepID=U9PT67_PSEAI
DNA repair protein RadC {ECO:0000313|EMBL:KHK65602.1}; TaxID=104087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas frederiksbergensis.;"
DNA repair protein RadC
S13_scaffold_688_curated_4
Pseudomonas frederiksbergensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3229..5532)
DNA (2304bp) protein (768aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GSP5_THISH rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK65601.1}; TaxID=104087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas frederiksbergensis.;"
hypothetical protein rbh
S13_scaffold_688_curated_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6083..6913
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FTH8_STRMK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAQ44875.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
S13_scaffold_688_curated_6
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6994..9048
DNA (2055bp) protein (685aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA010 RepID=U9MC05_PSEAI rbh
ParB-like protein {ECO:0000313|EMBL:KDD60161.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
plasmid stablization protein ParB
S13_scaffold_688_curated_7
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9112..9321
DNA (210bp) protein (70aa)
UPI0003D61627 related cluster n=1 Tax=unknown RepID=UPI0003D61627
putative/UNKNOWN PROTEIN
Uncharacterised protein {ECO:0000313|EMBL:CKH63832.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
S13_scaffold_688_curated_8
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9434..9952)
DNA (519bp) protein (173aa)
Uncharacterized protein n=7 Tax=Pseudomonas aeruginosa RepID=U8TW89_PSEAI rbh
GCN5 family acetyltransferase {ECO:0000313|EMBL:KEX89628.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (Arthrobacter siderocapsulatus).;"
GCN5-like N-acetyltransferase rbh
S13_scaffold_688_curated_9
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10754..11071
DNA (318bp) protein (106aa)
UPI0003D60373 related cluster n=1 Tax=unknown RepID=UPI0003D60373
y4eB protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CKH63796.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
S13_scaffold_688_curated_10
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11135..11440)
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Proteobacteria RepID=U9PMI0_PSEAI
Helix-turn-helix domain protein {ECO:0000313|EMBL:EXI88128.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
transcription regulator (helix turn helix motif) XRE family
S13_scaffold_688_curated_11
Pseudomonas plecoglossicida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11684..12034
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8WC65_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJG13758.1}; TaxID=70775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas plecoglossicida.;"
S13_scaffold_688_curated_12
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12344..13117
DNA (774bp) protein (258aa)
UPI0003D699D0 related cluster n=1 Tax=unknown RepID=UPI0003D699D0 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHC47888.1}; TaxID=1216976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans NBRC 15126 = ATCC 27061.;"
S13_scaffold_688_curated_13
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13201..13482
DNA (282bp) protein (94aa)
UPI0003D637F1 related cluster n=1 Tax=unknown RepID=UPI0003D637F1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHC47887.1}; TaxID=1216976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans NBRC 15126 = ATCC 27061.;"
S13_scaffold_688_curated_14
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13509..14366
DNA (858bp) protein (286aa)
Replication initiation protein CMGI-3 (GI family Tn4371) n=2 Tax=Proteobacteria RepID=Q1LNA8_RALME rbh
RepA replication protein {ECO:0000313|EMBL:KIL02508.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
repA; replication initiation protein CMGI-3 (GI family Tn4371) rbh
S13_scaffold_688_curated_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14620..15258
DNA (639bp) protein (213aa)
Chromosome partitioning protein n=2 Tax=Proteobacteria RepID=S2WSL9_DELAC rbh
Chromosome partitioning protein {ECO:0000313|EMBL:EPD42356.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
Chromosome (plasmid) partitioning protein ParA
S13_scaffold_688_curated_16
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15255..15527
DNA (273bp) protein (91aa)
UPI0003D608D3 related cluster n=1 Tax=unknown RepID=UPI0003D608D3
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH63595.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
S13_scaffold_688_curated_17
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15524..16057
DNA (534bp) protein (178aa)
UPI0003D615C9 related cluster n=1 Tax=unknown RepID=UPI0003D615C9 rbh
Glycosidase
Glycosidase {ECO:0000313|EMBL:AHC47883.1}; TaxID=1216976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans NBRC 15126 = ATCC 27061.;"
S13_scaffold_688_curated_18
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16054..16641
DNA (588bp) protein (196aa)
Conjugal transfer protein TraF n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IL24_BORPD rbh
Conjugal transfer pilin processing protease TraF {ECO:0000313|EMBL:CKH63538.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
traF1; conjugal transfer protein TraF rbh
Displaying 18 items

View Taxonomy