ggKbase home page

S13_scaffold_149_curated

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_149_curated_1
unknown

Not on your lists

comp(1..222)
DNA (222bp) protein (74aa)

This feature has no annotations

S13_scaffold_149_curated_2
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(219..2027)
DNA (1809bp) protein (603aa)
YD repeat protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WM31_VEREI rbh
YD repeat-containing protein rbh
YD repeat protein {ECO:0000313|EMBL:ABM58688.1}; Flags: Precursor;; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
S13_scaffold_149_curated_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3784..4233)
DNA (450bp) protein (150aa)
hypothetical protein id=12550616 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_149_curated_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4298..4747
DNA (450bp) protein (150aa)
general secretion pathway protein g; K02456 general secretion pathway protein G id=12550617 bin=BDI species=Acidovorax ebreus genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
general secretion pathway protein g
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_149_curated_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4965..5378
DNA (414bp) protein (138aa)
general secretion pathway protein H; K02457 general secretion pathway protein H id=12550618 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
general secretion pathway protein H
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_149_curated_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5375..5755
DNA (381bp) protein (127aa)
general secretion pathway protein I; K02458 general secretion pathway protein I id=12550619 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
general secretion pathway protein i
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_149_curated_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5758..6459
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXI0_9BURK rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_149_curated_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6456..7427
DNA (972bp) protein (324aa)
general secretion pathway protein K id=12550620 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
general secretion pathway protein K rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_149_curated_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7424..8656
DNA (1233bp) protein (411aa)
general secretion pathway L; K02461 general secretion pathway protein L id=12550621 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
general secretion pathway L rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_149_curated_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8653..9201
DNA (549bp) protein (183aa)
hypothetical protein id=12550622 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
general secretion pathway M protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_149_curated_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9232..10053
DNA (822bp) protein (274aa)
general secretory pathway N transmembrane protein id=12550623 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
general secretory pathway N transmembrane protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_149_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10067..12265
DNA (2199bp) protein (733aa)
General secretion pathway protein D n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXH0_9BURK rbh
General secretion pathway protein D {ECO:0000313|EMBL:AFU44485.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
general secretion pathway protein D rbh
S13_scaffold_149_curated_13
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12276..13664
DNA (1389bp) protein (463aa)
general secretory pathway protein E id=12553343 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
general secretory pathway protein E rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_149_curated_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15041..15841)
DNA (801bp) protein (267aa)
imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-) id=12549529 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-) rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_149_curated_15
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16017..17033)
DNA (1017bp) protein (339aa)
UDP-galactose 4-epimerase (EC:5.1.3.2) rbh
UDP-galactose 4-epimerase {ECO:0000313|EMBL:ABM31641.1}; EC=5.1.3.2 {ECO:0000313|EMBL:ABM31641.1};; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
UDP-galactose 4-epimerase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TL03_ACIAC rbh
S13_scaffold_149_curated_16
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17282..20116
DNA (2835bp) protein (945aa)
Polysaccharide deacetylase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W442_ACISJ rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:GAO20307.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
polysaccharide deacetylase rbh
S13_scaffold_149_curated_17
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20076..24041
DNA (3966bp) protein (1322aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TL01_ACIAC rbh
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABM31639.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
hypothetical protein rbh
S13_scaffold_149_curated_18
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24070..24621
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Acidovorax avenae RepID=UPI00031ACD33
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ADX44934.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
S13_scaffold_149_curated_19
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24640..26025
DNA (1386bp) protein (462aa)
membrane protein n=1 Tax=Acidovorax avenae RepID=UPI0002EF0FA1 rbh
hypothetical protein rbh
Putative transmembrane protein {ECO:0000313|EMBL:ABM31637.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
S13_scaffold_149_curated_20
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26018..27028
DNA (1011bp) protein (337aa)
Putative transmembrane protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QB70_ACIAP rbh
putative transmembrane protein rbh
Putative transmembrane protein {ECO:0000313|EMBL:ADX44932.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
S13_scaffold_149_curated_21
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27025..28557
DNA (1533bp) protein (511aa)
glycosyl transferase family 1 n=1 Tax=Acidovorax avenae RepID=UPI0002FCA17E rbh
hypothetical protein rbh
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABM31635.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
S13_scaffold_149_curated_22
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28557..29930
DNA (1374bp) protein (458aa)
OmpR family response regulator n=1 Tax=Acidovorax avenae RepID=UPI0003060C02 rbh
putative transmembrane protein rbh
Putative transmembrane protein {ECO:0000313|EMBL:ADX44930.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
S13_scaffold_149_curated_23
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29971..31137
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BX70_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:KJA09735.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein rbh
S13_scaffold_149_curated_24
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31152..31892)
DNA (741bp) protein (247aa)
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase id=12549527 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_149_curated_25
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31994..32662)
DNA (669bp) protein (223aa)
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-) id=12549526 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_149_curated_26
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32715..33338)
DNA (624bp) protein (208aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] id=12549525 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19) rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_149_curated_27
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33335..34453)
DNA (1119bp) protein (373aa)
histidinol-phosphate aminotransferase (EC:2.6.1.9) id=12549524 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
histidinol-phosphate aminotransferase (EC:2.6.1.9) rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_149_curated_28
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34450..34902)
DNA (453bp) protein (151aa)
PilT domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6Q4_9BURK
PilT domain-containing protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S13_scaffold_149_curated_29
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34906..35130)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXU7_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44600.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
S13_scaffold_149_curated_30
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35178..36626)
DNA (1449bp) protein (483aa)
Transcriptional regulator, GntR family with aminotransferase domain n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QB59_ACIAP rbh
GntR family transcriptional regulator rbh
Transcriptional regulator, GntR family with aminotransferase domain {ECO:0000313|EMBL:ADX44921.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
Displaying items 1-30 of 78 in total

View Taxonomy