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S13_scaffold_473_curated

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_473_curated_1
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(540..1442)
DNA (903bp) protein (301aa)
hypothetical protein id=12549678 bin=BDI species=Acidovorax ebreus genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_473_curated_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1529..4189)
DNA (2661bp) protein (887aa)
pyruvate dehydrogenase E1 n=1 Tax=Acidovorax radicis RepID=UPI00023762A8 rbh
2-oxoacid dehydrogenase subunit E1 rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_473_curated_3
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4292..4771
DNA (480bp) protein (160aa)
AsnC family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI00023762A7
asnC family transcriptional regulator
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
S13_scaffold_473_curated_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4713..5981)
DNA (1269bp) protein (423aa)
methionine gamma-lyase (EC:4.4.1.11) id=12549675 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
methionine gamma-lyase (EC:4.4.1.11) rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_473_curated_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6115..6594
DNA (480bp) protein (160aa)
asnC family transcriptional regulator id=12549674 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
asnC family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_473_curated_6
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6601..7272)
DNA (672bp) protein (224aa)
Phospholipase/Carboxylesterase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T3E5_ACIDE rbh
Phospholipase/Carboxylesterase {ECO:0000313|EMBL:EER60996.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
phospholipase/carboxylesterase rbh
S13_scaffold_473_curated_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7319..8152)
DNA (834bp) protein (278aa)
extradiol ring-cleavage dioxygenase III subunit B id=12549672 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
extradiol ring-cleavage dioxygenase III subunit B rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_473_curated_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8282..8692)
DNA (411bp) protein (137aa)
Class I peptide chain release factor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T3E7_ACIDE
class I peptide chain release factor
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_473_curated_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8713..9162)
DNA (450bp) protein (150aa)
3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10] id=12549671 bin=BDI species=Verminephrobacter eiseniae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
3-dehydroquinate dehydratase (EC:4.2.1.10)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_473_curated_10
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9326..9685)
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BT61_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL24418.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
S13_scaffold_473_curated_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9857..11698
DNA (1842bp) protein (614aa)
glutaminyl-tRNA ligase (EC:6.1.1.18) id=12549669 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
glutaminyl-tRNA ligase (EC:6.1.1.18) rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_473_curated_12
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11753..12757
DNA (1005bp) protein (335aa)
Phage-related regulatory protein n=3 Tax=Xanthomonas campestris pv. campestris RepID=B0RMG8_XANCB rbh
cII; phage-related regulatory protein cII rbh
Phage-related regulatory protein cII {ECO:0000313|EMBL:AAM43407.1}; TaxID=190485 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 /; NCPPB 528 / LMG 568 / P 25).;"
S13_scaffold_473_curated_13

Not on your lists

12754..13641
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B574A5
Uncharacterized protein {ECO:0000313|EMBL:KKK99119.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
S13_scaffold_473_curated_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13744..14070
DNA (327bp) protein (109aa)
hypothetical protein; K07075 id=12549667 bin=BDI species=Curvibacter putative symbiont of Hydra magnipapillata genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_473_curated_15
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14148..14438
DNA (291bp) protein (97aa)
DNA polymerase beta domain-containing protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C272_9BURK
DNA polymerase beta domain-containing protein {ECO:0000313|EMBL:EHL21397.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
DNA polymerase beta domain-containing protein
S13_scaffold_473_curated_16
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14472..14789
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DY25_9BACT
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
S13_scaffold_473_curated_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14882..15181
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I723_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47009.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
S13_scaffold_473_curated_18
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15355..16311
DNA (957bp) protein (319aa)
gcn5-related n-acetyltransferase; K06140 regulator of nucleoside diphosphate kinase id=12549651 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
Gcn5-like N-acetyltransferase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_473_curated_19
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16471..17427)
DNA (957bp) protein (319aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C266_9BURK rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHL21391.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein rbh
S13_scaffold_473_curated_20
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17470..18882
DNA (1413bp) protein (471aa)
trypsin n=1 Tax=Acidovorax radicis RepID=UPI0002375F34 rbh
trypsin-like serine protease rbh
Tax=GWA2_Burkholderiales_64_37_curated
S13_scaffold_473_curated_21
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18879..19865
DNA (987bp) protein (329aa)
FHA domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I740_9BURK rbh
FHA domain-containing protein rbh
FHA domain-containing protein {ECO:0000313|EMBL:AFU47014.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
S13_scaffold_473_curated_22
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19886..20215
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C263_9BURK
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHL21388.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
S13_scaffold_473_curated_23
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20416..20973
DNA (558bp) protein (186aa)
hypothetical protein id=12550169 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_473_curated_24
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21041..21778)
DNA (738bp) protein (246aa)
hypothetical protein id=12550182 bin=BDI species=unknown genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_473_curated_25
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21883..22347)
DNA (465bp) protein (155aa)
Putative uncharacterized protein id=1274818 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
S-isoprenylcysteine methyltransferase-like protein
Tax=BJP_08E140C01_Burkholderiales_65_30
S13_scaffold_473_curated_26
unknown

Not on your lists

comp(22334..22495)
DNA (162bp) protein (54aa)

This feature has no annotations

S13_scaffold_473_curated_27
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22531..22779
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T3G3_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER61014.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
S13_scaffold_473_curated_28
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22801..23367)
DNA (567bp) protein (189aa)
Putative lipoprotein (Fragment) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TCJ6_ACIDE
lipoprotein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_473_curated_29
unknown

Not on your lists

23647..23778
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying 29 items

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