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S13_scaffold_28_curated

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Displaying items 1-30 of 210 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_28_curated_1
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(211..546)
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DP2_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ47039.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
S13_scaffold_28_curated_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(772..1452)
DNA (681bp) protein (227aa)
DNA ligase III-like protein id=12553058 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
DNA ligase III-like protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_28_curated_3
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1459..2004)
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BWW3_9BURK rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHL23019.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
S13_scaffold_28_curated_4
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2015..3304)
DNA (1290bp) protein (430aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BWW2_9BURK rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHL23018.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein rbh
S13_scaffold_28_curated_5
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3397..5019)
DNA (1623bp) protein (541aa)
Methyl-accepting chemotaxis sensory transducer id=1287807 bin=GWE1_Burkholderiales_65_30 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
methyl-accepting chemotaxis sensory transducer rbh
Tax=CG_Rhodof_01
S13_scaffold_28_curated_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5214..6788)
DNA (1575bp) protein (525aa)
anaerobic nitric oxide reductase transcriptional regulator id=12553055 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
anaerobic nitric oxide reductase transcriptional regulator rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_28_curated_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6977..9283
DNA (2307bp) protein (769aa)
Nitric oxide reductase large subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0HLV2_9BURK rbh
nitric oxide reductase large subunit rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_28_curated_8
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9342..9752
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:EWS64582.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
hypothetical protein id=12553051 bin=BDI species=Achromobacter arsenitoxydans genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hemerythrin HHE cation-binding domain-containing protein
S13_scaffold_28_curated_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9909..11927
DNA (2019bp) protein (673aa)
anaerobic ribonucleoside triphosphate reductase; K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2] id=12553047 bin=BDI species=Acidovorax ebreus genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
anaerobic ribonucleoside triphosphate reductase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_28_curated_10
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12101..12289
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T705_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER59743.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
S13_scaffold_28_curated_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12318..13025
DNA (708bp) protein (236aa)
anaerobic ribonucleoside-triphosphate reductase activating protein; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] id=12553045 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
anaerobic ribonucleoside-triphosphate reductase activating protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_28_curated_12
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13056..13769)
DNA (714bp) protein (238aa)
RES domain protein n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZP02_THASP rbh
RES domain-containing protein rbh
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
S13_scaffold_28_curated_13
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13782..14177)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Pelodictyon luteolum (strain DSM 273) RepID=Q3B1W3_PELLD
hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
S13_scaffold_28_curated_14
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14863..16254)
DNA (1392bp) protein (464aa)
RNA-directed DNA polymerase n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EEA3_9BURK rbh
RNA-directed DNA polymerase {ECO:0000313|EMBL:EKZ97857.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
putative reverse transcriptase rbh
S13_scaffold_28_curated_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17437..19074
DNA (1638bp) protein (546aa)
pdc; phenylpyruvate decarboxylase; K04103 indolepyruvate decarboxylase [EC:4.1.1.74] id=12553042 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
indolepyruvate/phenylpyruvate decarboxylase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_28_curated_16
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19184..20590
DNA (1407bp) protein (469aa)
Aldehyde Dehydrogenase n=2 Tax=Thauera RepID=C4KB08_THASP rbh
aldehyde dehydrogenase rbh
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ACR01584.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
S13_scaffold_28_curated_17
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

20596..21141
DNA (546bp) protein (182aa)
Uncharacterized protein id=4210739 bin=GWC2_Elusimicrobia_64_44 species=unknown genus=Mesotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
S13_scaffold_28_curated_18
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21228..22583
DNA (1356bp) protein (452aa)
HipA domain-containing protein id=12553036 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_28_curated_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22591..23352)
DNA (762bp) protein (254aa)
TetR family transcriptional regulator n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UX42_VARPE
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:ADU37678.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
S13_scaffold_28_curated_20
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23488..23889
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NZ83_CHRVO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AAQ58714.1}; TaxID=243365 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /; NBRC 12614 / NCIMB 9131 / NCTC 9757).;"
S13_scaffold_28_curated_21
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23891..25369
DNA (1479bp) protein (493aa)
Probable FAD-dependent oxidoreductase n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NZ82_CHRVO rbh
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KHK55370.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
FAD-dependent oxidoreductase rbh
S13_scaffold_28_curated_22
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25366..26661
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U1A3V6_9NEIS rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK55371.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
hypothetical protein rbh
S13_scaffold_28_curated_23
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26697..27146
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Acidovorax avenae RepID=UPI00030EB701
Uncharacterized protein {ECO:0000313|EMBL:KGM42136.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
hypothetical protein
S13_scaffold_28_curated_24
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27189..28124
DNA (936bp) protein (312aa)
Putative uncharacterized protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QBB8_ACIAP
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
S13_scaffold_28_curated_25
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28135..29997)
DNA (1863bp) protein (621aa)
ATP-dependent DNA helicase RecQ; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12] id=12553034 bin=BDI species=Acidovorax sp. MR-S7 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
ATP-dependent DNA helicase RecQ rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_28_curated_26
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30250..30726
DNA (477bp) protein (159aa)
hypothetical protein id=12553033 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_28_curated_27
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30737..31042
DNA (306bp) protein (102aa)
hypothetical protein id=12553032 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_28_curated_28
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31054..31752
DNA (699bp) protein (233aa)
two component transcriptional regulator id=12553031 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
two component transcriptional regulator rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_28_curated_29
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31749..33122
DNA (1374bp) protein (458aa)
integral membrane sensor signal transduction histidine kinase id=12553030 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
integral membrane sensor signal transduction histidine kinase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
S13_scaffold_28_curated_30
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33155..33427
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12D93_POLSJ
hypothetical protein
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
Displaying items 1-30 of 210 in total

View Taxonomy
NameRatio
Burkholderiales
88.10%
unknown
3.81%
Pseudomonadales
1.90%
Rhodocyclales
1.43%
Streptomycetales
0.48%
Rhodospirillales
0.48%
Neisseriales
0.48%
Myxococcales
0.48%
Hydrogenophilales
0.48%
Enterobacteriales
0.48%
Desulfovibrionales
0.48%
Desulfobacterales
0.48%
Chromatiales
0.48%
Acidithiobacillales
0.48%
Burkholderiales: 0.8809523809523809unknown: 0.0380952380952381Pseudomonadales: 0.01904761904761905Rhodocyclales: 0.014285714285714285Acidithiobacillales: 0.004761904761904762Chromatiales: 0.004761904761904762Desulfobacterales: 0.004761904761904762Desulfovibrionales: 0.004761904761904762Enterobacteriales: 0.004761904761904762Hydrogenophilales: 0.004761904761904762Myxococcales: 0.004761904761904762Neisseriales: 0.004761904761904762Rhodospirillales: 0.004761904761904762Streptomycetales: 0.004761904761904762Burkholderiales