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S13_scaffold_470_curated

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_470_curated_1
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..926)
DNA (924bp) protein (308aa)
6-phospho-beta-glucosidase id=4186090 bin=GWF2_Firmicute_51_9 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
Diacetylchitobiose-6-phosphate hydrolase {ECO:0000313|EMBL:ETD67461.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
6-phospho-beta-glucosidase
S13_scaffold_470_curated_2
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(1094..2458)
DNA (1365bp) protein (455aa)
6-phospho-beta-glucosidase id=1975631 bin=GWE2_Firmicute_51_13 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
6-phospho-beta-glucosidase rbh
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_470_curated_3
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

Not on your lists

comp(2582..3091)
DNA (510bp) protein (170aa)
GNAT family acetyltransferase (EC:2.3.1.-)
acetyltransferase, GNAT family protein id=3239073 bin=GWF2_Firmicute_57_13 species=Epulopiscium sp. 'N.t. morphotype B' genus=Epulopiscium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=GWF2_Tenericutes_57_13_curated
S13_scaffold_470_curated_4
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(3152..4060)
DNA (909bp) protein (303aa)
SPFH domain/Band 7 family protein id=4641880 bin=GWF2_Firmicute_51_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute rbh
hypothetical protein rbh
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_470_curated_5
Erysipelothrix rhusiopathiae, Erysipelothrix, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4081..4509)
DNA (429bp) protein (143aa)
NfeD family protein n=1 Tax=Erysipelothrix tonsillarum RepID=UPI000363633C
NfeD family protein
NfeD family protein {ECO:0000313|EMBL:BAK32614.1}; TaxID=650150 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix.;" source="Erysipelothrix rhusiopathiae (strain Fujisawa).;"
S13_scaffold_470_curated_6
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4587..4877)
DNA (291bp) protein (97aa)
Uncharacterized protein n=3 Tax=Dehalobacter RepID=K4L4F2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV06400.1}; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. CF.;"
S13_scaffold_470_curated_7
GWF2_OD1_34_56, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4965..5255)
DNA (291bp) protein (97aa)
Predicted membrane protein n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CZP9_HALOH
Uncharacterized protein {ECO:0000313|EMBL:KKP64444.1}; TaxID=1618720 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF2_34_56.;"
hypothetical protein
S13_scaffold_470_curated_8
Paenibacillus sp. FSL R7-0273, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5327..6844)
DNA (1518bp) protein (506aa)
Cof-like hydrolase n=1 Tax=Yokenella regensburgei ATCC 43003 RepID=G9Z5F5_9ENTR
sugar phosphatase
Sugar phosphatase {ECO:0000313|EMBL:AIQ45782.1}; TaxID=1536772 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-0273.;"
S13_scaffold_470_curated_9
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6920..7816)
DNA (897bp) protein (299aa)
Oxidoreductase, aldo/keto reductase family protein id=1998323 bin=GWE2_Firmicute_51_13 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
Predicted oxidoreductase
Aldo/keto reductase {ECO:0000313|EMBL:EFV15600.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
S13_scaffold_470_curated_10
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7860..8873)
DNA (1014bp) protein (338aa)
Galactoside transport system permease protein mglC id=1933751 bin=GWE2_Firmicute_51_13 species=Clostridium tetani genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:ETO96685.1}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
mglC_2; beta-methylgalactoside transporter innermembrane component
S13_scaffold_470_curated_11
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(8885..10402)
DNA (1518bp) protein (506aa)
Putative uncharacterized protein id=4530254 bin=GWF2_Firmicute_51_9 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute rbh
mglA; galactoside transport ATP-binding protein mglA rbh
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_470_curated_12
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(10483..11475)
DNA (993bp) protein (331aa)
Putative uncharacterized protein id=1933747 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
mglB; methyl-galactoside transporter subunit ; periplasmic-binding component of ABC superfamily rbh
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_470_curated_13
Mollicutes bacterium HR2, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(11590..12600)
DNA (1011bp) protein (337aa)
D-galactose-binding periplasmic protein {ECO:0000313|EMBL:KFZ27164.1}; TaxID=1541960 species="Bacteria; Tenericutes; Mollicutes.;" source="Mollicutes bacterium HR2.;"
D-galactose-binding periplasmic protein (Gbp) (D-galactose/d-glucose-binding protein) (Ggbp) id=1287745 bin=GWE1_Spirochaete_60_18 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes rbh
D-galactose substrate-binding protein, ABC transporter subunit
S13_scaffold_470_curated_14
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

comp(12597..14318)
DNA (1722bp) protein (574aa)
Multi-sensor signal transduction histidine kinase id=2567906 bin=GWF2_Tenericutes_35_184 species=Clostridium cellulovorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35 rbh
Two-component sensor histidine kinase
Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
S13_scaffold_470_curated_15
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

comp(14299..15885)
DNA (1587bp) protein (529aa)
Two component transcriptional regulator, AraC family id=2567911 bin=GWF2_Tenericutes_35_184 species=Clostridium cellulovorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35 rbh
two component transcriptional regulator, AraC family
Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
S13_scaffold_470_curated_16
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16016..17026
DNA (1011bp) protein (337aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
Aldose 1-epimerase n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NVJ2_9FIRM
aldose 1-epimerase
S13_scaffold_470_curated_17
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17016..18290
DNA (1275bp) protein (425aa)
galactokinase (EC:2.7.1.6) rbh
Uncharacterized protein n=2 Tax=Anaerotruncus sp. G3(2012) RepID=R9LZF3_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EOS63903.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
S13_scaffold_470_curated_18
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(18867..19340)
DNA (474bp) protein (158aa)
Putative uncharacterized protein id=1805704 bin=GWE2_Firmicute_51_13 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
permease
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_470_curated_19
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19350..19985)
DNA (636bp) protein (212aa)
DNA-binding protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI000303CD5F
DNA-binding protein {ECO:0000313|EMBL:EWM52307.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
hypothetical protein
S13_scaffold_470_curated_20
Bacillus cellulosilyticus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20065..20322)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) RepID=E6TQE2_BACCJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU29320.1}; TaxID=649639 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141; / JCM 9156 / N-4).;"
S13_scaffold_470_curated_21
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

20575..21297
DNA (723bp) protein (241aa)
Short-chain dehydrogenase/reductase SDR id=3764192 bin=GWF2_Firmicute_51_9 species=Coprobacillus sp. 29_1 genus=Coprobacillus taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
hypothetical protein
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_470_curated_22
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

21609..22895
DNA (1287bp) protein (429aa)
Diaminopimelate decarboxylase n=1 Tax=Haloplasma contractile SSD-17B RepID=U2EBN4_9BACT rbh
diaminopimelate decarboxylase rbh
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_470_curated_23
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

22892..24097
DNA (1206bp) protein (402aa)
Aspartokinase n=1 Tax=Clostridium carboxidivorans P7 RepID=D6MHI9_9CLOT rbh
putative aspartate kinase, monofunctional class
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_470_curated_24
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

24094..24885
DNA (792bp) protein (264aa)
dapF; diaminopimelate epimerase DapF (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BNJ0_9FIRM
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_470_curated_25
Fusobacterium mortiferum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

24887..25864
DNA (978bp) protein (326aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=469616 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium mortiferum ATCC 9817.;"
Aspartate-semialdehyde dehydrogenase n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WBV2_FUSMR rbh
aspartate-semialdehyde dehydrogenase rbh
S13_scaffold_470_curated_26
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

25854..26723
DNA (870bp) protein (290aa)
Dihydrodipicolinate synthase id=1774733 bin=GWB2_Clostridiales_37_7 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good + rbh
dihydrodipicolinate synthase
Tax=GWB2_Clostridiales_37_7_curated
S13_scaffold_470_curated_27
Enterococcus mundtii, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26720..27451
DNA (732bp) protein (244aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1158598 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus mundtii ATCC 882.;"
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Enterococcus mundtii ATCC 882 RepID=R2PVZ0_ENTMU
dapB; dihydrodipicolinate reductase
S13_scaffold_470_curated_28
Enterococcus columbae, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27432..28142
DNA (711bp) protein (237aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00023633}; EC=2.3.1.89 {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00023632};; Tetrahydrodipicolinate N-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01691}; TaxID=1121865 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus columbae DSM 7374 = ATCC 51263.;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase n=1 Tax=Enterococcus columbae DSM 7374 = ATCC 51263 RepID=S1NK20_9ENTE rbh
DapD; tetrahydrodipicolinate N-succinyltransferase rbh
S13_scaffold_470_curated_29
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

28139..29254
DNA (1116bp) protein (372aa)
amidohydrolase (EC:3.5.1.32) rbh
Amidohydrolase id=2855702 bin=GWC2_Tenericute_34_14 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWC2_Tenericute_34_14 organism_group=Tenericutes organism_desc=Good + rbh
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_470_curated_30
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29317..30666
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B7Z4_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EGG80605.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase rbh
Displaying 30 items

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