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S13_scaffold_522_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_522_curated_1
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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1..600
DNA (600bp) protein (200aa)
Heat-inducible transcription repressor hrcA id=4084615 bin=GWF2_Firmicute_51_9 species=Erysipelothrix rhusiopathiae genus=Erysipelothrix taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
hrcA; heat-inducible transcription repressor
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_522_curated_2
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

597..1148
DNA (552bp) protein (184aa)
Protein GrpE id=4084614 bin=GWF2_Firmicute_51_9 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
GrpE protein HSP-70 cofactor
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_522_curated_3
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

1162..2964
DNA (1803bp) protein (601aa)
Chaperone protein DnaK id=1856195 bin=GWE2_Firmicute_51_13 species=Erysipelothrix rhusiopathiae genus=Erysipelothrix taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
dnaK; chaperone protein DnaK rbh
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_522_curated_4
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

3011..4123
DNA (1113bp) protein (371aa)
Chaperone protein DnaJ id=1856191 bin=GWE2_Firmicute_51_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
chaperone protein DnaJ rbh
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_522_curated_5
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

4163..6730
DNA (2568bp) protein (856aa)
ClpB protein id=1856186 bin=GWE2_Firmicute_51_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
ATP-dependent chaperone ClpB rbh
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_522_curated_6
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

6771..7817
DNA (1047bp) protein (349aa)
Putative uncharacterized protein id=1856178 bin=GWE2_Firmicute_51_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
hypothetical protein
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_522_curated_7
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

7795..8034
DNA (240bp) protein (80aa)
id=1856145 bin=GWE2_Firmicute_51_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_522_curated_8
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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8034..8705
DNA (672bp) protein (224aa)
Putative uncharacterized protein id=3676835 bin=GWF2_Firmicute_51_9 species=beta proteobacterium KB13 genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Firmicute_51_9 organism_group=Firmicute
conserved uncharacterized protein
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_522_curated_9
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(8693..10330)
DNA (1638bp) protein (546aa)
Putative uncharacterized protein id=1856141 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
fibronectin-binding protein rbh
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_522_curated_10
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

10428..10997
DNA (570bp) protein (190aa)
Guanylate kinase id=3676833 bin=GWF2_Firmicute_51_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
guanylate kinase
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_522_curated_11
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

11032..13170
DNA (2139bp) protein (713aa)
Primosomal protein N' id=3676832 bin=GWF2_Firmicute_51_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute rbh
primosomal protein N' rbh
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_522_curated_12
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

13167..14411
DNA (1245bp) protein (415aa)
Ribosomal RNA small subunit methyltransferase B id=1856135 bin=GWE2_Firmicute_51_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
rsmB; ribosomal RNA small subunit methyltransferase B
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_522_curated_13
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

14430..15470
DNA (1041bp) protein (347aa)
Probable dual-specificity RNA methyltransferase RlmN id=3676830 bin=GWF2_Firmicute_51_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute rbh
23s rRNA (adenine-C2)-methyltransferase rlmn
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_522_curated_14
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

15467..16201
DNA (735bp) protein (245aa)
serine/threonine protein phosphatase (EC:3.1.3.16)
Phosphatase PrpC id=1856131 bin=GWE2_Firmicute_51_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_522_curated_15
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

16198..17847
DNA (1650bp) protein (550aa)
Putative uncharacterized protein (Fragment) id=1856129 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
pknB; serine/threonine protein kinase rbh
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_522_curated_16
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

17847..18716
DNA (870bp) protein (290aa)
Putative ribosome biogenesis GTPase RsgA id=1856127 bin=GWE2_Firmicute_51_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
ribosome small subunit-dependent GTPase A
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_522_curated_17
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

18713..19366
DNA (654bp) protein (218aa)
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase id=1856125 bin=GWE2_Firmicute_51_13 species=Solobacterium moorei genus=Solobacterium taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_522_curated_18
Solobacterium moorei, Solobacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19351..19947
DNA (597bp) protein (199aa)
Thiamine diphosphokinase {ECO:0000313|EMBL:EFW24857.1}; EC=2.7.6.2 {ECO:0000313|EMBL:EFW24857.1};; TaxID=706433 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Solobacterium.;" source="Solobacterium moorei F0204.;"
Thiamine diphosphokinase n=1 Tax=Solobacterium moorei F0204 RepID=E7MM16_9FIRM
thiamine diphosphokinase
S13_scaffold_522_curated_19
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(19971..20180)
DNA (210bp) protein (70aa)
50S ribosomal protein L28 n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7G9_9FIRM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
rpmB; 50S ribosomal protein L28
Displaying 19 items

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