ggKbase home page

S13_scaffold_942_curated

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_942_curated_1
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

2..1318
DNA (1317bp) protein (439aa)
UPF0313 protein HMPREF9406_0631 id=4291023 bin=GWF2_Firmicute_51_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute rbh
radical SAM domain-containing protein rbh
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_942_curated_2
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1389..2381
DNA (993bp) protein (331aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
N-acetylglucosamine 6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6H0_9FIRM
S13_scaffold_942_curated_3
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

2426..3325
DNA (900bp) protein (300aa)
Diacylglycerol kinase catalytic region id=1855933 bin=GWE2_Firmicute_51_13 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
hypothetical protein
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_942_curated_4
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3330..4178
DNA (849bp) protein (283aa)
Aldose 1-epimerase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6H4_9FIRM
Aldose 1-epimerase {ECO:0000313|EMBL:EEF68397.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
aldose epimerase
S13_scaffold_942_curated_5
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

4171..4896
DNA (726bp) protein (242aa)
glucosamine-6-phosphate isomerase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase id=4291150 bin=GWF2_Firmicute_51_9 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_942_curated_6
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

4889..5770
DNA (882bp) protein (294aa)
HAD-superfamily hydrolase id=4291152 bin=GWF2_Firmicute_51_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
HAD-superfamily hydrolase, subfamily IIB
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_942_curated_7
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

5832..6146
DNA (315bp) protein (105aa)
Thioredoxin id=1855925 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
trxA.2; thioredoxin
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_942_curated_8
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

6272..6805
DNA (534bp) protein (178aa)
Putative uncharacterized protein id=4291156 bin=GWF2_Firmicute_51_9 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
XRE family transcriptional regulator
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_942_curated_9
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

6814..7857
DNA (1044bp) protein (348aa)
Spermidine/putrescine ABC transporter, ATP-binding protein id=4291158 bin=GWF2_Firmicute_51_9 species=Erysipelothrix rhusiopathiae genus=Erysipelothrix taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute rbh
spermidine/putrescine ABC transporter ATP-binding protein rbh
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_942_curated_10
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

7859..8167
DNA (309bp) protein (103aa)
Spermidine/putrescine ABC superfamily ATP binding cassette transporter, permease protein id=4291160 bin=GWF2_Firmicute_51_9 species=Erysipelothrix rhusiopathiae genus=Erysipelothrix taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
spermidine/putrescine ABC transporter permease
Tax=GWF2_Firmicutes_51_9_curated
Displaying 10 items

View Taxonomy