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S13_scaffold_822_curated

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_822_curated_1
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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comp(3..956)
DNA (954bp) protein (318aa)
Alpha-amylase id=4530244 bin=GWF2_Firmicute_51_9 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_51_9 organism_group=Firmicute rbh
putative alpha amylase
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_822_curated_2
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1231..2322)
DNA (1092bp) protein (364aa)
Sugar ABC transporter, ATP-binding protein id=1933734 bin=GWE2_Firmicute_51_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFP62100.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
msmX; multiple sugar ABC transporter ATP-binding protein MsmX rbh
S13_scaffold_822_curated_3
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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comp(2387..2950)
DNA (564bp) protein (188aa)
Transcriptional regulator id=1933731 bin=GWE2_Firmicute_51_13 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
transcriptional regulator
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_822_curated_4
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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comp(2951..4633)
DNA (1683bp) protein (561aa)
Putative uncharacterized protein id=1933722 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
amyA; putative alpha amylase
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_822_curated_5
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4703..5908)
DNA (1206bp) protein (402aa)
Diguanylate phosphodiesterase n=1 Tax=Clostridium intestinale URNW RepID=U2N5E0_9CLOT rbh
Diguanylate phosphodiesterase {ECO:0000313|EMBL:ERK30732.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
diguanylate phosphodiesterase rbh
S13_scaffold_822_curated_6
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5937..6308)
DNA (372bp) protein (124aa)
Flagellar protein FliS n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PA01_9FIRM
Flagellar protein FliS {ECO:0000313|EMBL:EDS11679.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
fliS; flagellar protein FliS
S13_scaffold_822_curated_7
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6311..8665)
DNA (2355bp) protein (785aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K3V2_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EGN45535.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
flagellar hook-associated 2 domain-containing protein
S13_scaffold_822_curated_8
unknown

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comp(8678..9010)
DNA (333bp) protein (111aa)

This feature has no annotations

S13_scaffold_822_curated_9
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8997..9239)
DNA (243bp) protein (81aa)
Carbon storage regulator n=1 Tax=Clostridium sp. MSTE9 RepID=J0WTW1_9CLOT
Carbon storage regulator {ECO:0000313|EMBL:EJF39801.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
carbon storage regulator
S13_scaffold_822_curated_10
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9241..9660)
DNA (420bp) protein (140aa)
Flagellar assembly factor FliW n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K3V5_9FIRM
Flagellar assembly factor FliW {ECO:0000256|HAMAP-Rule:MF_01185}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
S13_scaffold_822_curated_11
unknown

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comp(9668..10105)
DNA (438bp) protein (146aa)

This feature has no annotations

Displaying 11 items

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