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S13_scaffold_719_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_719_curated_1
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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3..749
DNA (747bp) protein (249aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase id=4160045 bin=GWF2_Firmicute_51_9 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute rbh
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase rbh
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_719_curated_2
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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860..1063
DNA (204bp) protein (68aa)
50S ribosomal protein L31 id=1933375 bin=GWE2_Firmicute_51_13 species=[Clostridium] spiroforme genus=unknown taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
rpmE; 50S ribosomal protein L31
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_719_curated_3
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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1131..1727
DNA (597bp) protein (199aa)
thymidine kinase (EC:2.7.1.21)
Thymidine kinase id=3668700 bin=GWF2_Firmicute_51_9 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute rbh
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_719_curated_4
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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1789..2871
DNA (1083bp) protein (361aa)
Peptide chain release factor 1 id=1933386 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
prfA; peptide chain release factor 1 rbh
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_719_curated_5
Firmicutes bacterium M10-2, Firmicutes, Bacteria

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2868..3710
DNA (843bp) protein (281aa)
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (EC:2.1.1.-)
Release factor glutamine methyltransferase id=3668703 bin=GWF2_Firmicute_51_9 species=[Eubacterium] dolichum genus=unknown taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
Protein-(Glutamine-N5) methyltransferase, release factor-specific {ECO:0000313|EMBL:EOS60086.1}; TaxID=1235796 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium M10-2.;"
S13_scaffold_719_curated_6
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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3886..4344
DNA (459bp) protein (153aa)
Putative uncharacterized protein id=1933399 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
rpiB; ribose-5-phosphate isomerase B
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_719_curated_7
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4331..5569
DNA (1239bp) protein (413aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
Serine hydroxymethyltransferase n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAG1_9FIRM rbh
glyA; glycine hydroxymethyltransferase rbh
S13_scaffold_719_curated_8
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

5585..6205
DNA (621bp) protein (207aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9) rbh
Uracil phosphoribosyltransferase id=3668760 bin=GWF2_Firmicute_51_9 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute rbh
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_719_curated_9
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

6249..6608
DNA (360bp) protein (120aa)
id=1933409 bin=GWE2_Firmicute_51_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_719_curated_10
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

6605..7309
DNA (705bp) protein (235aa)
ATP synthase subunit a id=3668762 bin=GWF2_Firmicute_51_9 species=Eremococcus coleocola genus=Eremococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
ATP synthase F0 subunit A
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_719_curated_11
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

7337..7573
DNA (237bp) protein (79aa)
Putative uncharacterized protein id=3668763 bin=GWF2_Firmicute_51_9 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
ATP synthase F0 subunit C
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_719_curated_12
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

7601..8110
DNA (510bp) protein (170aa)
ATP synthase subunit b id=3668764 bin=GWF2_Firmicute_51_9 species=Coprobacillus sp. 29_1 genus=Coprobacillus taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
atpF; F0F1 ATP synthase subunit B
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_719_curated_13
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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8110..8649
DNA (540bp) protein (180aa)
atpH; ATP synthase F0F1 subunit delta (EC:3.6.3.14)
ATP synthase subunit delta id=1933419 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_719_curated_14
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

8653..10173
DNA (1521bp) protein (507aa)
ATP synthase F1 subcomplex alpha subunit (EC:3.6.3.14) rbh
ATP synthase subunit alpha id=1933422 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_719_curated_15
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

10175..11035
DNA (861bp) protein (287aa)
ATP synthase, F1 gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain id=1933425 bin=GWE2_Firmicute_51_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_719_curated_16
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11045..12442
DNA (1398bp) protein (466aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
ATP synthase F1 subcomplex beta subunit (EC:3.6.3.14) rbh
ATP synthase subunit beta id=1933428 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
Displaying 16 items

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