name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
S15_scaffold_449_curated_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1..1071)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PSP5_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41378.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
rbh
|
|
S15_scaffold_449_curated_trna_1
unknown
|
Not on your lists |
comp(1379..1450)
|
transferRNA Gln
|
|
S15_scaffold_449_curated_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1975..3759
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PFB2_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41312.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
putative acyl-CoA dehydrogenase
rbh
|
|
S15_scaffold_449_curated_3
unknown
|
Not on your lists |
comp(3831..4079)
|
This feature has no annotations |
|
S15_scaffold_449_curated_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4240..5187)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIH1_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41311.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
lactoylglutathione lyase-like lyase
rbh
|
|
S15_scaffold_449_curated_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5326..6090
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PP88_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41310.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
enoyl-CoA hydratase/isomerase
rbh
|
|
S15_scaffold_449_curated_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6132..7061
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKN6_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41309.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
rbh
|
|
S15_scaffold_449_curated_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7299..7550
|
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
exodeoxyribonuclease VII small subunit n=1 Tax=Afipia birgiae RepID=UPI0003615F23
|
|
S15_scaffold_449_curated_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7947..9881
|
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
rbh
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PFA8_9BRAD
rbh
|
|
S15_scaffold_449_curated_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9987..10718
|
rrmJ; ribosomal RNA large subunit methyltransferase J (EC:2.1.1.-)
rbh
Hemolysin TlyA family protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIG6_9BRAD
rbh
Hemolysin TlyA family protein {ECO:0000313|EMBL:EKS41306.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
S15_scaffold_449_curated_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10880..12118
|
RNA methyltransferase (EC:2.1.1.-)
rbh
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PP83_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41305.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
S15_scaffold_449_curated_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13479..15161
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PSI2_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41303.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
putative chemotaxis sensory transducer
rbh
|
|
S15_scaffold_449_curated_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15459..17150
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PFA6_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41302.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
methyl-accepting chemotaxis protein
rbh
|
|
S15_scaffold_449_curated_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17199..18059)
|
LysR family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FG41_9RHIZ
rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KIZ37421.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
transcriptional regulator
rbh
|
|
S15_scaffold_449_curated_14
unknown
|
Not on your lists |
18172..18417
|
This feature has no annotations |
|
S15_scaffold_449_curated_15
unknown
|
Not on your lists |
18414..18650
|
This feature has no annotations |
|
S15_scaffold_449_curated_16
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18684..19112
|
Probable bacterial hemoglobin n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZM3_9BRAD
Probable bacterial hemoglobin {ECO:0000313|EMBL:EAQ34568.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hemoglobin
|
|
S15_scaffold_449_curated_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19113..20339)
|
guanylate cyclase (EC:4.6.1.1)
rbh
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKM7_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41299.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
S15_scaffold_449_curated_18
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20395..21561)
|
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002DD579A
rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP08558.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
rbh
|
|
S15_scaffold_449_curated_19
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21692..22888)
|
Salicylate hydroxylase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HAH7_9BRAD
rbh
Salicylate hydroxylase {ECO:0000313|EMBL:ERF81758.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
monooxygenase
|
|
S15_scaffold_449_curated_20
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22983..23492
|
Transcriptional regulatory protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89KD1_BRADU
Transcriptional regulator {ECO:0000313|EMBL:KJC56876.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
transcriptional regulator
|
|
S15_scaffold_449_curated_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23533..24615)
|
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
aroC; chorismate synthase AroC (EC:4.2.3.5)
rbh
chorismate synthase n=1 Tax=Afipia birgiae RepID=UPI000310EC00
rbh
|
|
S15_scaffold_449_curated_22
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24732..25331)
|
phosphoglycerate kinase n=1 Tax=Afipia birgiae RepID=UPI0002F3360F
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41295.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
phosphoglycerate mutase
rbh
|
|
S15_scaffold_449_curated_23
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25478..26299)
|
enoyl-ACP reductase (EC:1.3.1.9)
rbh
Enoyl-[acyl-carrier-protein] reductase [NADH] 1 {ECO:0000313|EMBL:AEI05898.1}; EC=1.3.1.9 {ECO:0000313|EMBL:AEI05898.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
enoyl-ACP reductase n=1 Tax=Afipia birgiae RepID=UPI0002D570DF
rbh
|
|
S15_scaffold_449_curated_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26640..27131
|
RNA polymerase sigma factor n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKM2_9BRAD
rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
sigma-24 (FecI-like)
|
|
S15_scaffold_449_curated_25
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27349..28119
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PSH3_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41293.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
rbh
|
|
S15_scaffold_449_curated_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28135..29370)
|
DNA-binding protein n=1 Tax=Afipia birgiae RepID=UPI0002E243C6
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41292.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
rbh
|